YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DI193_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DI193_ORYSJ.

Description E-value Query
Range
Subject
Range
DI191_ORYSJ - Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1
227.0 [0..1] [246..1]

Back

Predicted Domain #1
Region A:
Residues: [1-60]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSEHWISSL AAAKRFYAAQ LGHVDDMAGI GMEEVEMEME DDGEGMELEL EMQLEEATWP  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.954
Match: 1oxnA
Description: Structure and Function Analysis of Peptide Antagonists of Melanoma Inhibitor of Apoptosis (ML-IAP)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0497616690106703 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [61-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVACPYCYED HDIASLCAHL EEDHPYEPHT SPCPICFEKI TRDMLNHITM QHGYLFKSGR  60
   61 RMRRFDIPES QALSLLSRDL RDAQLQALLG GGHRQRRSNT TATNISADPL LSSFGLGFST 120
  121 LDSEERSKAP VPIPDDTSIH KDTPAQPWES RIDSSLTSEE REQKRKQATD RATFVQGLVL 180
  181 STLFED

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.28
Match: 2a25A
Description: Crystal structure of Siah1 SBD bound to the peptide EKPAAVVAPITTG from SIP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle