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View Structure Prediction Details

Protein: gi|78706792, gi|...
Organism: Drosophila melanogaster
Length: 517 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|78706792, gi|....

Description E-value Query
Range
Subject
Range
gi|108873998, gi... - gi|157124431|ref|XP_001654056.1| sodium/dicarboxylate cotransporter, putative [Aedes aegypti], gi|10...
320.0 [0..10] [516..61]

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Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSWRIIWQA FQCMYLVANM ALFWITEAIP LYLTALFPVV FLPLFGILTS EKVCSFYFSD  60
   61 TVVMFIGGLL IALAIEYSNL HQRIALNTIL IVGCSPRRLH FGLVMVTCFI SLWISNSAAT 120
  121 AMMCPIVKAV LNEMETQNIF AIY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [144-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTQEEEPVEE GDPPHPSTIS MAFYFGIAYS SSIGGCGTLI GTGTNLTYKG LYDTRFPNSD  60
   61 EKIDFPIFMA YSVPFVVLVL IFLTYFSLQV THMGLFRPNS KIGQEVKKGA ESQDVVKDVI 120
  121 KQRKAELGPM SCHEIQVGLL FVLMIFLLFT RKPGFF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [300-517]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGWADFLNAK AIGSGPPVFF ATILLFALPT QYTFFKYCCG KAPFPGQTLD ACLSWVYCQK  60
   61 YTPFGLAFLL GGFALAEGSR VSGMAKMLGE SLAFAGEMHS VLVISMCIII SLFCTAFASN 120
  121 VAICNILIPI FSEMALAIEV HPMKLTFPAA LACSLAFHLP VSTPPNAIIS GFTGLKTKYM 180
  181 AIAGILPTCW AFLCLLFTGT VWTMLIYPGT TEFPSWAI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle