YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Cpr92A-PA
Organism: Drosophila melanogaster
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Cpr92A-PA.

Description E-value Query
Range
Subject
Range
gi|54657094 - gi|54657094|gb|EAL35927.1| DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain [Cryptosporidiu...
gi|67597591 - gi|67597591|ref|XP_666157.1| DNA-directed RNA polymerase II largest chain [Cryptosporidium hominis T...
151.0 [0..42] [242..1621]

Back

Predicted Domain #1
Region A:
Residues: [1-157]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKISLLSAM LGIAYAGVIG PGPYYGGPAG PGPLHHYGGY APQHGPLPGP YVAPKPAAPE  60
   61 PYDPDPKYSF GYDIQDGYTG DLKSQHETRH GDVVKGSYSV VDPDGTKRTV DYTADPHHGF 120
  121 NAVVRKEPLA YKAPAHLAPV VAPAPAPVPA HYGPAPA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 31.657577
Match: PF00379.14
Description: No description for PF00379.14 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [158-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPLPPVPKAP LLSYPLALGP YHRGAPAPAP GPAPAPAPAP VSVPVATPVL PSAHFHAAYP  60
   61 ALAHSPYAHY PAPGPAPAPV EPHAYYHH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.16
Match: 1q1qA
Description: Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle