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View Structure Prediction Details

Protein: FBpp0292336, Obp...
Organism: Drosophila melanogaster
Length: 218 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0292336, Obp....

Description E-value Query
Range
Subject
Range
gi|54635706, gi|... - gi|54635706|gb|EAL25109.1| GA15623-PA [Drosophila pseudoobscura], gi|125807851|ref|XP_001360534.1| G...
158.0 [0..34] [207..1]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCFCCARLIS GSSRNWSYKV SRRCQTKLRL TKKMARHIAL LICSLLAMAG CDPIDVDCTR  60
   61 RQDFNIVKDC CVYPTFRFDQ FKSQCGKYMP VGAPRISPCL YECIFNKTNT VVDGAIHPDN 120
  121 ARLMLEKLFG NQDFEEAYFN GLMGCSDSVQ EMISNRRSRP QRKTEQCSPF SLFYGICAQR 180
  181 YVFNHCPSSS WSGTESCEMA RLQNMNCSKP SRGSSHRL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.28
Match: 1ow4A
Description: Crystal structure of a pheromone binding protein from the cockroach Leucophaea maderae in complex with the fluorescent reporter ANS (1-anilinonaphtalene-8-sulfonic acid),
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
odorant binding 4.34740138836018 bayes_pls_golite062009
pheromone binding 2.50061185527994 bayes_pls_golite062009
binding 1.71868583149917 bayes_pls_golite062009
phenylalkylamine binding 1.10044668642283 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle