| Protein: | Ih-PC, FBpp03009... |
| Organism: | Drosophila melanogaster |
| Length: | 618 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ih-PC, FBpp03009....
| Description | E-value | Query Range |
Subject Range |
|
|
376.0 | [0..1] | [618..673] |
|
Region A: Residues: [1-362] |
1 11 21 31 41 51
| | | | | |
1 MVHFDDVSLY GTPKEEPMPN IPIVSEKVSA NFLKSQLQSW FQPTDNRLAM KLFGSRKALV 60
61 KERIRQKTSG HWVIHPCSSF RFYWDLCMLL LLVANLIILP VAISFFNDDL STRWIAFNCL 120
121 SDTIFLIDIV VNFRTGIMQQ DNAEQVILDP KLIAKHYLRT WFFLDLISSI PLDYIFLIFN 180
181 QDFSDSFQIL HAGRALRILR LAKLLSLVRL LRLSRLVRYV SQWEEVYFLN MASVFMRIFN 240
241 LICMMLLIGH WSGCLQFLVP MLQGFPSNSW VSINELQESY WLEQYSWALF KAMSHMLCIG 300
301 YGRFPPQSLT DMWLTMLSMI SGATCYALFL GHATNLIQSL DSSRRQYREK VKQVEEYMAY 360
361 RK
|
| Detection Method: |  |
| Confidence: | 31.522879 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [363-418] |
1 11 21 31 41 51
| | | | | |
1 LPRDMRQRIT EYFEHRYQGK FFDEELILGE LSEKLREDVI NYNCRSLVAS VPFFAN
|
| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 1q3eA |
| Description: | HCN2J 443-645 in the presence of cGMP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [419-618] |
1 11 21 31 41 51
| | | | | |
1 ADSNFVSDVV TKLKYEVFQP GDIIIKEGTI GTKMYFIQEG VVDIVMANGE VATSLSDGSY 60
61 FGEICLLTNA RRVASVRAET YCNLFSLSVD HFNCVLDQYP LMRKTMETVA AERLNKIGKN 120
121 PNIMHQKDEQ LSNPESNTIT AVVNALAAEA DDCKDDDMDL KENLLHGSES SIAEPVQTIR 180
181 EGLPRPRSGE FRALFEGNTP
|
| Detection Method: | |
| Confidence: | 16.39794 |
| Match: | 2pqqA |
| Description: | No description for 2pqqA was found. |
