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View Structure Prediction Details

Protein: CheB53b-PA
Organism: Drosophila melanogaster
Length: 204 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CheB53b-PA.

Description E-value Query
Range
Subject
Range
CheB38c-PA - The gene Chemosensory protein B 38c is referred to in FlyBase by the symbol Dmel\CheB38c (CG14405, F...
281.0 [0..10] [200..4]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQLFRIWQ LLVLMAFIPH SIEVSYEFTM EDERITSDCQ NEPPKTLNID GLFDMSNIDF  60
   61 EMAEDGVQLS GYKTVVWDIQ PTDRVELQGS VQYFDRGTWQ PTTLNMLVKD FCHVLFDKKQ 120
  121 VWYDAYSKHI TNSAQINNTC FRVKGSVIEF ETYTIGLEFG SGIPLHRGRY AIRLKFRAFD 180
  181 KNGKVRPNEI CFEIKGQFSK KSLG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.45
Match: 2agcA
Description: Crystal Structure of mouse GM2- activator Protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle