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View Structure Prediction Details

Protein: Vkor-PA
Organism: Drosophila melanogaster
Length: 152 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vkor-PA.

Description E-value Query
Range
Subject
Range
gi|74095973, gi|... - gi|74095973|ref|NP_001027838.1| vitamin K epoxide reductase complex subunit 1 [Takifugu rubripes], g...
136.0 [0..4] [150..5]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQAYSTASR LRGICVCGLA ISVYSLYVKM KLKEDENYRP MCDVNDNISC SLVFKSGYGD  60
   61 GFGLGNITQV NAPNGAIGCA FYILYF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 4.142668
Match: PF07884.5
Description: No description for PF07884.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-152]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSSFFNHRWL CLVQLIVCTL TLLLCVYLGF LLILVFYDFC LVCVTIYFIH TWLFQEVLRR  60
   61 YRRLYM

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.955
Match: 2hi7B
Description: No description for 2hi7B was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle