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View Structure Prediction Details

Protein: gi|61678346, gi|...
Organism: Drosophila melanogaster
Length: 1998 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|61678346, gi|....

Description E-value Query
Range
Subject
Range
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
655.0 [0..207] [1998..107]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLSLERDSS ALGSLFQQII NDMKNTSPLW EDFVAKAGKL HTCLRAAIQA IAAYLDAFQK  60
   61 IADAATNSRG ASKEIGTALT RVCLRHKAVE TRLKTFTSTI MDCLVQPLQE RIEDWKRTVA 120
  121 TIDKDHAKEY KRCRSELKKR SSDTLRLQKK ARKGQTDGLQ SLMDSHMQDV TLRRAELEEV 180
  181 EKKSLRAAMV EERLRYCSFV HMLQPVVHEE CEVMSELGHL QEAMQSIALV TKEPSVLPQA 240
  241 SEELIHDAKA SINLYPESP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 123.0
Match: 2d1lA
Description: No description for 2d1lA was found.

Predicted Domain #2
Region A:
Residues: [260-483]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGGSGSQGGG CSNSLGSRKS SVCSISSMNS SGSSNSPGHH HYPRSLSQTS NATNQTANVS  60
   61 TWPPHSQDGV DTLPPTADRP HTISTAYEKG HQRPPLTVYT FQNPETIHES GSCLNNGTAA 120
  121 PNGQPLSGQA TPATQKSPAA SLSRPPLPVR CSSLERPLSA QSNHRQGSGN NLLQRQCPSP 180
  181 IPAHITKELS AAHHAQQQQQ QQNQQPQTPP TYVNMSELAT MAAL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [484-632]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQTNQQQKPS TPPLQQQSSI DSTSSQHSND STGSHQLLQQ QQQHHQSQQN HHSATATRSH  60
   61 SISSTASSLH SHPSIDSTVA CGSLVGQHNH STSTNTNTTS PSSGSSTPQN HYSPLLTNSP 120
  121 TSTAAGTPSG SSLGPGSGLG FVYQVSSPT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [633-868]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPSSEVLKIT EQAAAGQDQG PANSVADETD ERSRASVLQK ASMFEKAAAA AAVSPPAPMQ  60
   61 IASGSPASGG GTRRSEAEQQ EMDKSFEDSI QALNNLIGEL DSFQREIDEG KVKPPSNIIS 120
  121 GSTTSSNNNN TTTSSISSSD NNNLPATSNI EPCAISNQTN SSGCGTDISD TTSDELAGDD 180
  181 MDVRRRDRDR DRDLLGASDS ELSRCYVSET SSLTGGLTAG GYENPTFAHF AANANR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [869-1118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDAVSLASDS VCLGQPRHAY VDTCSDSGSA VVVIYDHQIP NTPDIEFVKQ NSEIVVLRTK  60
   61 DPQPHALQLH EMRELQQLPA NLAGSPDSSP DSAGGQAPPT ATVAPAKQRL SSFRATSEQQ 120
  121 LQLLGRGSPQ RGKTPSEQAV QSRPQDQHFP QTQQQDIDGS SPPVELARRQ LPPKPTSLSI 180
  181 FNGPVPTAGD RPVVPRKSDF KADLDAKIRR QKQKVKQQLQ QQQQQQQQEQ QETQQQQQAP 240
  241 QEQQHSPQSP 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [1119-1208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTRNCNVTNQ QAANITASAS AFATATASTD PYPNPNHRMP NQNQTATSNH TQCKTPTMAL  60
   61 SPSSPRGHLP LSSSSLSSLP LPATTSSPSN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1209-1372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ARPSMLPASD RPPAHPYVCS NAPANPHHAN SISNANAHLK PCITPRPASL SGGAAGGGST  60
   61 RIGRRSSINQ SKPPPPVRRS SSVTPSPNAS VGLQQQPQHA TLSQQNHQLS SSSEHLPPPP 120
  121 PFMLDAMPQI PSSALKVSET VRALAAMRHQ PASPVSLRRM QQQQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1373-1544]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQQLQQQQQQ QVQQQQPLLQ SAHNSPLKED LTVYYDSYLD LHAYAQALAS GQQPGGQQMA  60
   61 NQQRFTLQQQ HQHLHQPQQP PVYQVDATFR TSSPAAGGGG GGGIYAQPKL VNSMSSFRTS 120
  121 SPSPNGHAHP LPPTQPKANP NLIAQLNARL SGKQQQHQQQ QHIEGIYGNQ QA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [1545-1643]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGGESIYMRS GLSMSQPQQQ QHFDGKSEQI QLQHQQQHRI YASFGTSSSA MSSAHAANSS  60
   61 TKPSILTPTT SFNALPHFPL SSSTSSLLSK VSSFSNSSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [1644-1753]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASPPTTAATS GSASSHYQPP QPPNAAVANS KDMAIYSSSF TKNPAAAQSP NMRQAHSHQH  60
   61 HQPPQQQHYT CPPPLEDPPP PPIYAAGASA TMPKKMARPP TGQNATHSSA 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [1754-1998]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YAAASSTATL PKNMMQQQQR LQHQQQYQQP AGMGIGNGNG HLGQRPQLPL PQQKLRAAQQ  60
   61 QHLAEQQHQQ QQEQQQHHQQ HQQHQQRQPP IPSRHSSVQQ KIFVSTNPFI QTTAVKFHSP 120
  121 SASPTCGSPV TGSLASIYAT TSRGGHHHQQ QQAQQQQHYY RDAAGGNSNG GAAYYNHNAH 180
  181 AHSQAHHPNW QYSCQDQGRI PRESQREAGE AGNVWTSICR AKSHQQQGPD VSKSAKTIAT 240
  241 QCAIP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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