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View Structure Prediction Details

Protein: CG9220-PC, FBpp0...
Organism: Drosophila melanogaster
Length: 832 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG9220-PC, FBpp0....

Description E-value Query
Range
Subject
Range
gi|31158517 - gi|31158517|gb|AAO85275.1| chondroitin synthase-like protein [Drosophila melanogaster]
756.0 [0..6] [832..1]

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Predicted Domain #1
Region A:
Residues: [1-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQHTMTKRK TLIIGFFGIA LGLCIGTMLK NYLALEIVKR CSLRPTNLKT PADIIGLRDE  60
   61 DTIQNSQRNL VFVGVMTAKS FLEGRARAVY DTWGKEVPGR MAFFSSEGSY SDDLPVVGLK 120
  121 NVDDRYPPQK KSFMMLYYMY EHYIDRFEWF IRADDDVYME PDKLERFLRS IDSSKPQFIG 180
  181 QAGKGNSEEF GLLSLEFDEN FCMGGPGVIL SSETLRRVAP HIPSCLKNLY STHEDVEVGR 240
  241 CVQKFAGIPC TWNYEMQYIL RHNSSGRNAY TGKLKRKEIH NAITLHPIKQ APLMYRLHSY 300
  301 VQGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.69897
Match: 2j0aA
Description: No description for 2j0aA was found.

Predicted Domain #2
Region A:
Residues: [305-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAEEMRQESL LLHRDIKRMA KYLEVPDEST YMLPSVSPES DSTKRHFQDH NILGISPELN  60
   61 KFVPASTDDL LDWSFIARSL YSASSANPKQ KIDSAMREGL EDAITEVMEN INNYSRQRGR 120
  121 VIEFRELLYG YHRLDALHGQ DMILDLLLIY K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [456-832]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KYRGKKMTVP VRRHLYVQRA FTGIFVKEVD EDFYNVTLQQ SLLGSLFQNG MARLSSHFTM  60
   61 PSGLLSPTQD KIVFVLPIAG RLGTFERFLR TYERVCVRGE QHCDLLVVIF GSPDELGDHL 120
  121 QLLHDLHARH VYQQVNWIQR SSAFSRGVAL DVAARSSYIR QEDIILFIDV DMVFEVETLQ 180
  181 RVRMHTQRGK QVYLPIVFSQ YDPQRRSGDA GGSEDEGETP RIDDERGYFR QFGFGICAIY 240
  241 KSDILDEDIN GFDKDITGWG LEDVKFLEKI VRVGTRQRGF LANTAELAMD YNEAAEQWRR 300
  301 LSVFRAPDPT LVHIYHDISC DVQLDAPQYN MCLGTKANSL GSTRLMEQLF HSSPENVQFA 360
  361 ADFNRQKQQQ QQQQQAR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.21
Match: 2d7iA
Description: No description for 2d7iA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle