| Protein: | CG11155-PB |
| Organism: | Drosophila melanogaster |
| Length: | 855 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11155-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
481.0 | [0..9] | [855..1] |
|
Region A: Residues: [1-488] |
1 11 21 31 41 51
| | | | | |
1 MVRKKREIVI KENIQGRSYL KKICCSYIIL SILVISNALP PVIRVGAIFT EDERESSIES 60
61 AFKYAIYRIN KEKTLLPNTQ LVYDIEYVPR DDSFRTTKKV CSQLEAGVQA IFGPTDALLA 120
121 SHVQSICEAY DIPHIEGRID LEYNSKEFSI NLYPSHTLLT LAYRDIMVYL NWTKVAIIYE 180
181 EDYGLFNLMH SSTETKAEMY IRQASPDSYR QVLRAIRQKE IYKIIVDTNP SHIKSFFRSI 240
241 LQLQMNDHRY HYMFTTFDLE TYDLEDFRYN SVNITAFRLV DVDSKRYLEV INQMQKLQHN 300
301 GLDTINGSPY IQTESALMFD SVYAFANGLH FLNLDNHQNF YIKNLSCTSD QTWNDGISLY 360
361 NQINAAITDG LTGTVQFVEG RRNIFKLDIL KLKQEKIQKV GYWHPDDGVN ISDPTAFYDS 420
421 NIANITLVVM TREERPYVMV KEDKNLTGNL RFEGFCIDLL KAIATQVGFQ YKIELVPDNM 480
481 YGVYIPET
|
| Detection Method: |  |
| Confidence: | 47.69897 |
| Match: | 2e4uA |
| Description: | No description for 2e4uA was found. |
|
Region A: Residues: [489-576] |
1 11 21 31 41 51
| | | | | |
1 NSWNGIVQEL MERRADLAVA SMTINYARES VIDFTKPFMN LGIGILFKVP TSQPTRLFSF 60
61 MNPLAIEIWL YVLAAYILVS FALFVMAR
|
| Detection Method: | |
| Confidence: | 18.30103 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [577-659] |
1 11 21 31 41 51
| | | | | |
1 FSPYEWKNPH PCYKETDIVE NQFSISNSFW FITGTFLRQG SGLNPKISDR AQTKFFSFIA 60
61 PFAVEIWFYI AFGYIFVSVS IWI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [660-785] |
1 11 21 31 41 51
| | | | | |
1 VARLSPIEWV ISKPPCSMAC DHMLREIQKE NYFDERLELI SKQKISENEV YLSTDHKIKK 60
61 SNNCVEHDTT CGHGTLPLHL PNDVNDGASD DNTVDLVRIQ NNFTLKNSFW FAIGALMQQG 120
121 SDLYPR
|
| Detection Method: | |
| Confidence: | 17.522879 |
| Match: | 1ftkA |
| Description: | Glutamate receptor ligand binding core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [786-855] |
1 11 21 31 41 51
| | | | | |
1 ATSTRIVGGC WFFFCLIIIS SYTANLAAFL TVERMISPIE SASDLAEQTE ISYGTLEGGS 60
61 TMTFFRHNKL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
