YRC Public Data Repository - Protein Structure Prediction

Protein:	YC0H_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	198 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YC0H_SCHPO.

Description	E-value	Query Range	Subject Range
YGK1_YEAST - HD domain-containing protein YGL101W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL... YGL101W - Putative protein of unknown function; non-essential gene with similarity to YBR242W; interacts with ...	202.0	[0..9]	[195..29]
gi\|46122575, gi\|... - gi\|46122575\|ref\|XP_385841.1\| hypothetical protein FG05665.1 [Gibberella zeae PH-1], gi\|42552393\|gb\|E...	197.0	[0..3]	[194..50]
gi\|45198483, gi\|... - gi\|45198483\|ref\|NP_985512.1\| AFL036Cp [Ashbya gossypii ATCC 10895], gi\|44984434\|gb\|AAS53336.1\| AFL03... gi\|44984434 - gi\|44984434\|gb\|AAS53336.1\| AFL036Cp [Ashbya gossypii ATCC 10895]	196.0	[0..1]	[193..18]
gi\|49644524\|emb\|... - unnamed protein product [Kluyveromyces lactis NRRL Y-1140] gi\|49644524, gi\|... - gi\|50310733\|ref\|XP_455388.1\| unnamed protein product [Kluyveromyces lactis], gi\|49644524\|emb\|CAG9809...	196.0	[0..10]	[193..70]
gi\|110742669 - gi\|110742669\|dbj\|BAE99246.1\| hypothetical protein [Arabidopsis thaliana]	192.0	[0..10]	[188..77]
gi\|125984069, gi... - gi\|54644116\|gb\|EAL32858.1\| GA10728-PA [Drosophila pseudoobscura], gi\|125984069\|ref\|XP_001355799.1\| G...	191.0	[0..3]	[187..165]
CG11050-PA, CG11... - This gene is referred to in FlyBase by the symbol Dmel\CG11050 (CG11050, FBgn0031836). It is a prote...	188.0	[0..3]	[187..174]

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Predicted Domain #1

Region A:
Residues: [1-198]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAAKSLSIV PFLDCLSRLK TTPRTGWLYH GIEKPESIAD HMYRMGILTM LCNDPSINKE  60
   61 RCLKIAVVHD MAESIVGDIT PHENVSKEEK HRMESEAMVS ITQQLIPLNL SLQAEEIKEL 120
  121 FLEYESASTP EAKFVKDIDK FEMIAQMFEY ERKFNGEKDL SQFTWAGKLI QHPLVKGWLN 180
  181 DVLQEREQFW ASVRQKKL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.69897
Match:	1xx7A
Description:	Conserved hypothetical protein from Pyrococcus furiosus Pfu-403030-001
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
phosphoric ester hydrolase activity	0.544743879169147	bayes_pls_golite062009
catalytic activity	0.304053477190873	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.285002229892032	bayes_pls_golite062009
hydrolase activity	0.0970938726988847	bayes_pls_golite062009
binding	0.0452101909535716	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: