| Protein: | Lerp-PB |
| Organism: | Drosophila melanogaster |
| Length: | 887 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Lerp-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
784.0 | [0..1] | [887..1] |
|
Region A: Residues: [1-491] |
1 11 21 31 41 51
| | | | | |
1 MRCSLQKDCA APTQENFRQQ MRFPIVISLL LLLFCSGESV AADAANQLKF STTECKLKEP 60
61 IYGSTFDFSG LHSDLAHVVK SMNIGGDQFE FNICGNLSRT CNGESNVAAC LKRQGKEYIL 120
121 GRQHELFYNN GNMFLKYKSG AKCDNGTADK PNYQLHVMFS CDYTLDAQPM HVTPYANEVC 180
181 SFYISYRTPL ACLSIPEGLQ SNSCRVGDTK SNGTFDLMPL SDSNYHTSNR QGAFFVINVC 240
241 KPVLYGENSM CPAGSSVCLF DSKATNPKER FINFGNVQTH PVVEKGQLLL RHESPTPCAK 300
301 NSSANYTSVI YFSCDKFIRN AHPEFAGLGA DSCTYQFNFA TPLACNDLKP CTAFTSTNEL 360
361 LDLSSLSSKP ARTLLKDGKN YTIAVCAHAG APCQENGGAC YEQNSTTISL GNSNSQLRFN 420
421 QTGSLYLLYE DGAECSTATG MRRWSTKIEF VCANNATKDN GASTAGGSDS LKIIEDSNCQ 480
481 LLIQYQTPLA C
|
| Detection Method: |  |
| Confidence: | 61.045757 |
| Match: | 1q25A |
| Description: | Crystal structure of N-terminal 3 domains of CI-MPR |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [492-660] |
1 11 21 31 41 51
| | | | | |
1 REPIRCKATT YVDHTNDGLG SSGDELIDLT PLISATDNYE ARVELPASME HLVPKTTKFF 60
61 LNVCRPLVPK YQLGCAGGSA ACMAKVTAAG APEEERSMGF PLVSLTQRNR TFAELAYLKG 120
121 DPCPTDNTSE LSTHILFNCN MRAGRGQPVL RSVEDCAYRF EWETNVFCP
|
| Detection Method: | |
| Confidence: | 3.3 |
| Match: | 1keoA |
| Description: | Cation-dependent mannose 6-phosphate receptor, extracytoplasmic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.28747861690557 | bayes_pls_golite062009 |
| binding | 1.10138386107409 | bayes_pls_golite062009 |
|
Region A: Residues: [661-887] |
1 11 21 31 41 51
| | | | | |
1 PHECTFSADT CDLVHDELGR RFNFKSAPFT KDGKIEIDYN ATKMSVNICG AHRKAMTDYS 60
61 QALVNIFFTH ESPNCGREGT MNVQIRLICS DQTESSSTIS SDQQCNLLYV QRTPSICEFL 120
121 SLGATQQNFE SNGSTSSSTS SSSTSTTTST TTQASPAAIL GAILSVTFCV TCLGLLAFSP 180
181 ARRQRIRRLF RRSNSAVRYS RVQSNEEANL LLEPNGEFTE SDDDMLL
|
| Detection Method: | |
| Confidence: | 3.30103 |
| Match: | 1ck7A |
| Description: | Gelatinase A (MMP-2); Gelatinase A (MMP-2), C-terminal domain; Gelatinase A; Gelatinase A (MMP-2) type II modules |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 0.873001869096005 | bayes_pls_golite062009 |
| binding | 0.813983818243772 | bayes_pls_golite062009 |
