YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|58465200, gi\|...
Organism:	Physcomitrella patens
Length:	153 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|58465200, gi|....

Description	E-value	Query Range	Subject Range
gi\|109472730, gi... - gi\|109474348\|ref\|XP_001069775.1\| PREDICTED: similar to mago-nashi homolog [Rattus norvegicus], gi\|10...	314.0	[0..6]	[153..57]
gi\|57106514, gi\|... - gi\|73958681\|ref\|XP_850352.1\| PREDICTED: similar to mago-nashi homolog [Canis familiaris], gi\|5710651... MGN2_BOVIN - Protein mago nashi homolog 2 OS=Bos taurus GN=MAGOHB PE=2 SV=1 gi\|149713919 - gi\|149713919\|ref\|XP_001500370.1\| PREDICTED: similar to Mago-nashi homolog 2 [Equus caballus] gi\|109095628 - gi\|109095628\|ref\|XP_001115410.1\| PREDICTED: similar to mago-nashi homolog isoform 2 [Macaca mulatta] gi\|114643564 - gi\|114643564\|ref\|XP_520743.2\| PREDICTED: hypothetical protein [Pan troglodytes]	303.0	[0..6]	[153..1]
MAGOHB - mago-nashi homolog B (Drosophila)	303.0	[0..6]	[153..1]
gi\|108872119, gi... - gi\|157129592\|ref\|XP_001655409.1\| mago nashi, putative [Aedes aegypti], gi\|157126173\|ref\|XP_001660832...	303.0	[0..5]	[153..1]
gi\|197129864, gi... - gi\|224058235\|ref\|XP_002197766.1\| PREDICTED: putative mago-nashi [Taeniopygia guttata], gi\|197129864\|... gi\|126305686 - gi\|126305686\|ref\|XP_001370837.1\| PREDICTED: similar to Mago-nashi homolog 2 [Monodelphis domestica] gi\|149444019 - gi\|149444019\|ref\|XP_001508653.1\| PREDICTED: similar to Mago-nashi homolog 2 [Ornithorhynchus anatinu... MGN_CHICK - Protein mago nashi homolog OS=Gallus gallus GN=MAGOH PE=2 SV=2	301.0	[0..9]	[153..2]
gi\|148688936, gi... - gi\|26354182\|dbj\|BAB24516.2\| unnamed protein product [Mus musculus], gi\|148688936\|gb\|EDL20883.1\| RIKE...	301.0	[0..6]	[153..1]
gi\|218186682 - gi\|218186682\|gb\|EEC69109.1\| hypothetical protein OsI_38020 [Oryza sativa Indica Group] MGN_ORYSJ - Protein mago nashi homolog OS=Oryza sativa subsp. japonica GN=Os12g0287200 PE=2 SV=2 MGN_ORYSA - Protein mago nashi homolog (Mago nashi-like protein) - Oryza sativa (Rice)	301.0	[0..10]	[153..15]
gi\|225717370 - gi\|225717370\|gb\|ACO14531.1\| mago nashi homolog [Esox lucius] gi\|216263217 - gi\|216263217\|gb\|ACJ72014.1\| mago-nashi [Galaxias depressiceps] gi\|229367238 - gi\|229367238\|gb\|ACQ58599.1\| mago nashi homolog [Anoplopoma fimbria] MGN_SALSA - Protein mago nashi homolog OS=Salmo salar GN=magoh PE=2 SV=1 MGN_DANRE - Protein mago nashi homolog OS=Danio rerio GN=magoh PE=2 SV=1	301.0	[0..9]	[153..3]
MGN_XENLA - Protein mago nashi homolog OS=Xenopus laevis GN=magoh PE=2 SV=1	300.0	[0..10]	[153..3]

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Predicted Domain #1

Region A:
Residues: [1-153]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVHAEELG EFYVRYYVGH KGKFGHEFLE FEFRPDGKLR YANNSNYKND TMIRKEVFLT  60
   61 QAALKECRRI ITDSEILKED DNNWPEPDRI GRQELEIVMG NEHISFTTSK IGSLLDVQSS 120
  121 KDPEGLRIFY YLVQDLKCFV FSLIGLHFKI KPI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	81.69897
Match:	2hyiA
Description:	No description for 2hyiA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits