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View Structure Prediction Details

Protein: gi|62734333, gi|...
Organism: Oryza sativa Japonica Group
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62734333, gi|....

Description E-value Query
Range
Subject
Range
PLA15_ARATH - Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana GN=At1g06800 PE=1 SV=2
323.0 [0..7] [458..8]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIHLTNPPP GLYATKTPSQ QQQQHRPAGS HAAAAAAATV AMPQTASAAS SSVAVKKNMR  60
   61 QAAPVVVARR RTTAVESGGV ALASVWREVQ GERDWEGMVE 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [101-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTAEEELHPL LRGEIVRYGE LVAATYKAFD LDAASKRYLN CKYGKARMLD EVGMAGAGYE  60
   61 VTRYIYAAPD LAAGPPCPSR WIGYVAVATD EAVRRLGRRD IVVSFRGTVT GSEWVANMMS 120
  121 SLAPARFDPA DPRPDVKVES GFLSVYTSDD ATCRFTCGSC RNQLLSEVTR LIAKHKHEDV 180
  181 SVTLAGHSMG SSLALLLGYD LAELGLNRDA RGRAVPITVF SFAGPRVGNT AFKDRCDELG 240
  241 VKVLRVVNVN DPITKLPGIF LNENSRVLGG KLELPWSSSC YTHVGVELAL DFFKARDPAC 300
  301 VHDLEAYLGL LKCPKVTKVM KEGEDLFSKA KKIVLEQSFD TWRWQMAAIQ VGGLVQALGM 360
  361 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.0
Match: 1dt3A
Description: Triacylglycerol lipase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle