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View Structure Prediction Details

Protein: gi|77549704, gi|...
Organism: Oryza sativa Japonica Group
Length: 506 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|77549704, gi|....

Description E-value Query
Range
Subject
Range
gi|115712687, gi... - gi|115923998|ref|XP_001181978.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus], gi...
483.0 [0..4] [500..29]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDDIDARYE VPRTAEFIRA RAYTRVALQF PDEMLRDAAA VAQALRRELG GGGVKLFVMA  60
   61 DTAYNSCCVD EVGASHIDAQ CVVHYGHACM SPTSNLPAFF VFGKTPLDTD ACGRSLLECS 120
  121 RESD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [125-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRILVFYGLE YAHALDDLKA VVAELYKSHS RSVEVQYADV LCSVMSPSSA AEVEHGQSDG  60
   61 STHSDDLSIQ SDVATFVNNC 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [205-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CNVEGSTRKY SLGGLTWSTS IDDNMEDYLL YWIGQDNSAF ANIVLTFNKC DIVRYDTVAN  60
   61 QPSRDVSHLM KILRRRYYLV EKAKDANIVG ILVGTLGVAG YLHIIEQMKD LIKAAGKKSY 120
  121 TLVMGRPNSA KLANFPECEV FVYVSCAQTA LLDSKDFLAP VITPFEAVLA FSRGREWTGE 180
  181 YLLDFKDLIT TDKPEISSTT E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [406-506]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EARFSFIKGG YVEDNCLEDN EEQPETSLAL AEVTEKALSI KNQNNDAVLY QGGAKSAIDY  60
   61 LKARSYRGLT GEYEGPAPDS VLTGRTGRAA GYNNEKKEIT Q

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle