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View Structure Prediction Details

Protein: gi|62734750, gi|...
Organism: Oryza sativa Japonica Group
Length: 476 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62734750, gi|....

Description E-value Query
Range
Subject
Range
ILVH1_ARATH - Acetolactate synthase small subunit 1, chloroplastic OS=Arabidopsis thaliana GN=VAT1 PE=1 SV=1
460.0 [0..31] [476..36]

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Predicted Domain #1
Region A:
Residues: [1-64]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATATAASRL AVAGAEPARA RRHRPTTVAV CGGARPRSRP AAVVAAAGAA APSPATGGVA  60
   61 PVPP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [65-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPRGSIIKRH TLSVFVGDES GMINRIAGVF ARRGYNIESL AVGLNKDKAL FTIVVSGTEK  60
   61 ILKQVVEQLN KLVNVIQVDD LSKEPQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 2p9cA
Description: No description for 2p9cA was found.

Predicted functions:

Term Confidence Notes
acetolactate synthase activity 14.1096734416761 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 12.4176994384119 bayes_pls_golite062009
catalytic activity 0.645256181736122 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [151-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VERELMLIKL NVEPDKRPEV MGLVDIFRAK VVDLSDHTLT IEVTGDPGKI VAVQRNLSKF  60
   61 GIKEIARTGK IALRREKMGE SAPFWRFSAA SYPDLEVAMP 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.63
Match: 2pc6A
Description: No description for 2pc6A was found.

Predicted functions:

Term Confidence Notes
acetolactate synthase activity 13.4983176932446 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 11.8909767013645 bayes_pls_golite062009
catalytic activity 0.622433877919357 bayes_pls_golite062009

Predicted Domain #4
Region A:
Residues: [251-476]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKSHVNTAMK TANQNSEESS QGDVYPVESY ENFTTNQILD AHWGVMADGD PTGLCSHSLS  60
   61 ILVNDFPGVL NVVTGVFSRR GYNIQSLAVG PAEKEGTSRI TTVVPGTDES IAKLVHQLYK 120
  121 LIDVYEVQDL THLPFAAREL MIIKIAVNTT ARRAILDIAD IFRAKTVDVS DHTVTLQLTG 180
  181 DLDKMVALQR MLEPYGICEV ARTGRVALRR ESGVDSKYLR GFSLPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.30103
Match: 2pc6A
Description: No description for 2pc6A was found.

Predicted functions:

Term Confidence Notes
acetolactate synthase activity 14.1096734416761 bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups 12.4176994384119 bayes_pls_golite062009
catalytic activity 0.645256181736122 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle