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View Structure Prediction Details

Protein: gi|62701821, gi|...
Organism: Oryza sativa Japonica Group
Length: 172 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62701821, gi|....

Description E-value Query
Range
Subject
Range
gi|215740709, gi... - gi|55168250|gb|AAV44116.1| unknown protein [Oryza sativa Japonica Group], gi|215740709|dbj|BAG97365....
250.0 [0..1] [161..77]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFERWWLPP PPEVKKPRSL YNAASLAYLG DCIYELYARR HFFFPPLSIN DYNKRVMDVV  60
   61 KCESQDLLLN KLLGEDFLTQ EERDILRWGR NIVSSKTRTR KRAGIAVYNR ASSLETLIGY 120
  121 LYLTNFKRLE QLMFQLGFTS GASSQHIADE LRSSFQTKNS SRSVQSKQEA AK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.0
Match: 1u61A
Description: X-ray crystal structure of conserved hypothetical protein from Bacillus cereus
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.350623299985386 bayes_pls_golite062009
hydrolase activity 0.149411760935002 bayes_pls_golite062009
endonuclease activity 0.0885458536287509 bayes_pls_golite062009
nuclease activity 0.0537730417264266 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.0104013778512019 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle