YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YDW6_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 535 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDW6_SCHPO.

Description E-value Query
Range
Subject
Range
gi|39944792, gi|... - gi|39944792|ref|XP_361933.1| hypothetical protein MGG_04378 [Magnaporthe grisea 70-15], gb|EAA50619....
329.0 [0..2] [530..15]
gi|40746544, gi|... - gi|67516025|ref|XP_657898.1| hypothetical protein AN0294.2 [Aspergillus nidulans FGSC A4], ref|XP_40...
312.0 [0..8] [532..23]
gi|220701028, gi... - gi|238483479|ref|XP_002372978.1| mitochondrial integral membrane protein [Aspergillus flavus NRRL335...
gi|169766714 - gi|169766714|ref|XP_001817828.1| hypothetical protein [Aspergillus oryzae RIB40]
gi|83765683 - gi|83765683|dbj|BAE55826.1| unnamed protein product [Aspergillus oryzae]
287.0 [0..8] [531..33]
gi|159130540 - gi|159130540|gb|EDP55653.1| integral membrane protein [Aspergillus fumigatus A1163]
gi|66847691, gi|... - gi|70990420|ref|XP_750059.1| mitochondrial integral membrane protein [Aspergillus fumigatus Af293], ...
285.0 [0..8] [532..27]
gi|46433678, gi|... - gi|68487640|ref|XP_712301.1| potential vacuolar protein [Candida albicans SC5314], gi|46433678|gb|EA...
orf19.1183 - orf19.1183 CGDID:CAL0002129 Assembly 19, Contig19-10099 (6749, 8395) CDS, translated using codon tab...
271.0 [0..2] [529..5]
gi|115387241, gi... - gi|115387241|ref|XP_001211126.1| conserved hypothetical protein [Aspergillus terreus NIH2624], gi|11...
268.0 [0..3] [532..29]
gi|90304110, gi|... - gi|90304110|gb|EAS33741.1| hypothetical protein CIMG_04765 [Coccidioides immitis RS], gi|119189435|r...
254.0 [0..10] [531..36]
gi|111067281 - gi|111067281|gb|EAT88401.1| hypothetical protein SNOG_04641 [Phaeosphaeria nodorum SN15]
251.0 [0..10] [531..49]
gi|116207056, gi... - gi|88183418|gb|EAQ90886.1| hypothetical protein CHGG_02821 [Chaetomium globosum CBS 148.51], gi|1162...
243.0 [0..13] [529..35]

Back

Predicted Domain #1
Region A:
Residues: [1-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTSQDVNAE AANERSALLP RFLGSHRGNV PENTDTYALT PLFYWIRSTS VGLLLITIIC  60
   61 HLFLLLNIFI SIPIISHLSP GFMPVGFTAL AAILLAMQIM FVYSPNAPER VTQRIICFLL 120
  121 AIDVLVVFLS PILRHREGWR SNAFVLWAFL MSLWIVITDL MLFRQYKEEH P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [172-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYDAIAHRGY YWSWSPSTWP WRQVGSLTAS TILSVILTIL TIHTLVTLIM RAYDGALSAP  60
   61 GQLYTVTDSK ARVHLECFGS SSSNNKTTVL VEGGEVSVHP FKEWLLNLQH TSPDLYEESK 120
  121 DFEGYENDVK PYLSPDTRVC VWDRPGMGWS DNIGSPSSVG IVMDLLTEAL AQADVSGPYV 180
  181 LVAHGIGGVY SNVFAARHLS EVKGIVFVDA GSVQTLKDSG QFLSRFLLFV RGWLSPLGIN 240
  241 RIFGSIFMGK TRQDRVYGMY SWTSDRWVKS KIEESLTGPS FSRYELQSAQ SVLPKDLPVS 300
  301 VISAGKSMKR FKKWPDEQRQ LSKLTQRTVW DIVNNAPHDV WLSDDGGDLI MKRLGEIIYG 360
  361 GWPN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.522879
Match: 1cqzA
Description: Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 0.685577841077355 bayes_pls_golite062009
catalytic activity 0.629869101256762 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle