YRC Public Data Repository - Protein Structure Prediction

Protein:	NMT_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	466 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NMT_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|83769130 - gi\|83769130\|dbj\|BAE59267.1\| unnamed protein product [Aspergillus oryzae] gi\|169773601 - gi\|169773601\|ref\|XP_001821269.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|238491608, gi... - gi\|238491608\|ref\|XP_002377041.1\| peptide N-myristoyl transferase (Nmt1) [Aspergillus flavus NRRL3357...	711.0	[0..4]	[466..41]
gi\|159125068 - gi\|159125068\|gb\|EDP50185.1\| peptide N-myristoyl transferase (Nmt1) [Aspergillus fumigatus A1163] NMT_ASPFU - Glycylpeptide N-tetradecanoyltransferase OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS... NMT_ASPFU - Glycylpeptide N-tetradecanoyltransferase OS=Aspergillus fumigatus GN=nmt1 PE=2 SV=1	706.0	[0..4]	[466..36]
NMT_EMENI - Glycylpeptide N-tetradecanoyltransferase OS=Emericella nidulans GN=swoF PE=1 SV=1 gi\|40739914, gi\|... - gi\|67526763\|ref\|XP_661443.1\| NMT_ASPFU Glycylpeptide N-tetradecanoyltransferase (Peptide N-myristoyl...	703.0	[0..4]	[466..35]
gi\|115397967, gi... - gi\|115397967\|ref\|XP_001214575.1\| glycylpeptide N-tetradecanoyltransferase [Aspergillus terreus NIH26...	688.0	[0..5]	[466..45]
gi\|85092191 - gi\|85092191\|ref\|XP_959272.1\| glycylpeptide N-tetradecanoyltransferase [Neurospora crassa OR74A] gi\|28920675, gi\|... - gi\|32413463\|ref\|XP_327211.1\| hypothetical protein [Neurospora crassa], gi\|28920675\|gb\|EAA30036.1\| gl...	687.0	[0..6]	[462..110]
gi\|90300412, gi\|... - gi\|90300412\|gb\|EAS30043.1\| hypothetical protein CIMG_08789 [Coccidioides immitis RS], gi\|119180274\|r...	684.0	[0..10]	[466..71]
NMT_NEUCR - Glycylpeptide N-tetradecanoyltransferase OS=Neurospora crassa GN=nmt-1 PE=3 SV=2 NMT_NEUCR - Glycylpeptide N-tetradecanoyltransferase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS ...	684.0	[0..6]	[466..110]
NMT1_ARATH - Glycylpeptide N-tetradecanoyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=1 SV=2	683.0	[0..1]	[466..1]
gi\|27735395, gi\|... - gi\|27735395\|gb\|AAH41300.1\| Nmt1-prov protein [Xenopus laevis], gi\|148228100\|ref\|NP_001080192.1\| N-my...	680.0	[0..9]	[465..63]
gi\|167887633, gi... - gi\|55665859\|emb\|CAH73972.1\| N-myristoyltransferase 2 [Homo sapiens], gi\|167887633\|gb\|ACA06030.1\| gly...	677.0	[0..1]	[465..101]

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Predicted Domain #1

Region A:
Residues: [1-466]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNENNKNTK NSQQDSSFSE GGIRELLDRL ALRSLIEKEE AAAPPKTYED FKFWKTQPVP  60
   61 KFDDECTQEG PIDPNTDINQ VPREPYRLLK EFEWATIDVT NDNELSEVHE LLTENYVEDA 120
  121 TAMLRFAYIS EFLRWALMPP GYVKEWHVGV RVKSSRKLVA FISAVPLSIR VRDKIIKKCA 180
  181 EVNFLCIHKK LRSKRLTPLL IKEVTRRCHL ENVWQAVYTA GVLLPSPVSL SRYMHRSLNW 240
  241 KKLYDIGFAP FPLGSTEKKE TAKYHLPPNT QTPGLRPMEL KDVPAVQSLL SQYMERFELA 300
  301 HLFSEEEVRH WFLYTDKVSS GPVVWSYVVE NPESKKITDF FSFYSLPSTV IGNPKYKDIQ 360
  361 AAYLYYYASD SCPKDLSSES QLAFVERCKL IVNDALILAK KFHFDVFNAV TVLDNNLFLK 420
  421 DLKFGEGDGF LNYYIYNYNC PKIPGGIDAS KSVDYSRPSG MGFVMI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	2p6eA
Description:	No description for 2p6eA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits