YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|190690585, gi...
Organism:	synthetic construct
Length:	373 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|190690585, gi....

Description	E-value	Query Range	Subject Range
gi\|20799646 - gi\|20799646\|gb\|AAM28589.1\|AF503208_1 glutamine synthetase [Oreochromis niloticus]	0.0	[1..371]	[1..371]
gi\|44890316, gi\|... - gi\|44890316\|gb\|AAH66735.1\| Glutamate-ammonia ligase (glutamine synthase) b [Danio rerio], gi\|3350451...	0.0	[1..372]	[1..372]
gi\|74183933 - gi\|74183933\|dbj\|BAE37022.1\| unnamed protein product [Mus musculus]	0.0	[1..373]	[1..373]
GLNA_CANLF - Glutamine synthetase OS=Canis lupus familiaris GN=GLUL PE=1 SV=3	0.0	[1..373]	[1..373]
gi\|18252824 - gi\|18252824\|gb\|AAL62448.1\| glutamine synthetase [Bostrychus sinensis]	0.0	[1..371]	[1..371]
gi\|543097 - pir\|\|S41452 glutamate-ammonia ligase (EC 6.3.1.2) - pig GLNA_PIG - Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV=3	0.0	[1..373]	[1..373]
gi\|54696412, gi\|... - gi\|61367855\|gb\|AAX43057.1\| glutamate-ammonia ligase [synthetic construct], gi\|60825988\|gb\|AAX36742.1...	0.0	[1..373]	[1..373]

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Predicted Domain #1

Region A:
Residues: [1-373]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTSASSHLN KGIKQVYMSL PQGEKVQAMY IWIDGTGEGL RCKTRTLDSE PKCVEELPEW  60
   61 NFDGSSTLQS EGSNSDMYLV PAAMFRDPFR KDPNKLVLCE VFKYNRRPAE TNLRHTCKRI 120
  121 MDMVSNQHPW FGMEQEYTLM GTDGHPFGWP SNGFPGPQGP YYCGVGADRA YGRDIVEAHY 180
  181 RACLYAGVKI AGTNAEVMPA QWEFQIGPCE GISMGDHLWV ARFILHRVCE DFGVIATFDP 240
  241 KPIPGNWNGA GCHTNFSTKA MREENGLKYI EEAIEKLSKR HQYHIRAYDP KGGLDNARRL 300
  301 TGFHETSNIN DFSAGVANRS ASIRIPRTVG QEKKGYFEDR RPSANCDPFS VTEALIRTCL 360
  361 LNETGDEPFQ YKN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	118.0
Match:	2uu7A
Description:	No description for 2uu7A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits