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View Structure Prediction Details

Protein: gi|56807554
Organism: Streptococcus pyogenes M49 591
Length: 338 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|56807554.

Description E-value Query
Range
Subject
Range
GPDA_BACCN - Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 ...
280.0 [0..5] [336..3]

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Predicted Domain #1
Region A:
Residues: [1-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKQKVAILG PGSWGTALSQ VLNDNGHDVR LWGNIPDQIE EINTKHTNRH YFKDIVLDKN  60
   61 ITATLDLGQA LSDVDAVLFV VPTKVTRLVA RQVAAILDHK VVVMHASKGL EPETHERLST 120
  121 ILEEEIPAHF RSEVVVVSGP SHAEETIVRD ITLITAASKD IEAAKYVQSL FSNHYFRLYT 180
  181 NTDVIGVETA GALKNIIAVG AGALHGLGYG DNAKAAVITR GLAEITRLGV KLGADPLTYS 240
  241 GLSGVGDLIV TGTSVHSRNW RAGAALGRGE KLEDIERNMG MVIEGIATTK VAYEIAQDLG 300
  301 VYMPITTAIY KSIYEGADIK ESILGMMSNE FRSENEWH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.045757
Match: 1z82A
Description: Crystal structure of glycerol-3-phosphate dehydrogenase (TM0378) from THERMOTOGA MARITIMA at 2.00 A resolution
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle