YRC Public Data Repository - Protein Structure Prediction

Protein:	DPH5_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	283 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DPH5_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|29895119, gi\|... - gi\|30019575\|ref\|NP_831206.1\| uroporphyrin-III C-methyltransferase [Bacillus cereus ATCC 14579], gi\|2... gi\|229043267, gi... - gi\|229043267\|ref\|ZP_04190989.1\| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus AH676], gi... gi\|229144126, gi... - gi\|229144126\|ref\|ZP_04272541.1\| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus BDRD-ST24]... gi\|229126841, gi... - gi\|229126841\|ref\|ZP_04255853.1\| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus BDRD-Cer4]... gi\|228674452, gi... - gi\|229108983\|ref\|ZP_04238584.1\| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus Rock1-15],...	224.0	[0..3]	[276..6]
gi\|40642724 - gi\|40642724\|emb\|CAD48921.1\| uroporphyrinogen III methyltransferase [Bacillus megaterium]	222.0	[0..3]	[281..5]
gi\|27316645, gi\|... - gi\|27469096\|ref\|NP_765733.1\| uroporphyrin-III C-methyltransferase [Staphylococcus epidermidis ATCC 1...	222.0	[0..3]	[266..8]
gi\|57865554, gi\|... - gi\|57865554\|ref\|YP_189745.1\| uroporphyrin-III C-methyltransferase, putative [Staphylococcus epidermi...	221.0	[0..3]	[266..5]
gi\|228651038, gi... - gi\|229132332\|ref\|ZP_04261186.1\| Uroporphyrinogen-III C-methyltransferase [Bacillus cereus BDRD-ST196... gi\|89154233, gi\|... - gi\|89207808\|ref\|ZP_01186339.1\| Uroporphyrin-III C-methyltransferase, C-terminal [Bacillus weihenstep...	221.0	[0..3]	[276..5]
gi\|42736543, gi\|... - gi\|42780623\|ref\|NP_977870.1\| uroporphyrin-III C-methyltransferase [Bacillus cereus ATCC 10987], gi\|4...	220.0	[0..3]	[276..5]
gi\|83770514 - gi\|83770514\|dbj\|BAE60647.1\| unnamed protein product [Aspergillus oryzae] gi\|220698147, gi... - gi\|238489043\|ref\|XP_002375759.1\| diphthine synthase, putative [Aspergillus flavus NRRL3357], gi\|2206... gi\|169763172 - gi\|169763172\|ref\|XP_001727486.1\| hypothetical protein [Aspergillus oryzae RIB40]	219.0	[0..1]	[282..1]
gi\|115252480, gi... - gi\|126701043\|ref\|YP_001089940.1\| porphyrin biosynthesis protein [Clostridium difficile 630], gi\|1152...	218.0	[0..3]	[260..9]
gi\|75760415, gi\|... - gi\|75760415\|ref\|ZP_00740458.1\| Uroporphyrin-III C-methyltransferase [Bacillus thuringiensis serovar ...	218.0	[0..3]	[276..6]
gi\|47566316, gi\|... - gi\|47566316\|ref\|ZP_00237344.1\| uroporphyrin-III C-methyltransferase [Bacillus cereus G9241], gi\|4755...	217.0	[0..3]	[276..5]

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Predicted Domain #1

Region A:
Residues: [1-283]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYLIGLGLF DEKDITLRGL ETVKKCQRIY LEAYTSILLV QKEKLEELYG KEVILADREM  60
   61 VESSSDEILK DADNCDVAML VVGDPMGATT HADLVIRARE LKIPVRMIHN ASIMNAIGAC 120
  121 GLQLYKFGQT VSLVFFENNY RPQSFYDHIK ENVSLGLHTL VLLDIKVKEQ SWENLARGRK 180
  181 VYEPPRYMSA SLAAQQMLEV EEDRQENICT PDSLCVAVGR MGSDDQVIFA GTLQELAEHD 240
  241 IGPPLHSVVL VGRDVHDLEL EFLRAYAVNL ENFDRVAKTY LEK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	36.522879
Match:	2dv4A
Description:	No description for 2dv4A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits