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View Structure Prediction Details

Protein: gi|123982998, gi...
Organism: synthetic construct
Length: 321 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123982998, gi....

Description E-value Query
Range		 Subject
Range
gi|74226877 - gi|74226877|dbj|BAE27083.1| unnamed protein product [Mus musculus]
 3.0E-90 [81..321] [87..327]
gi|114677245 - gi|114677245|ref|XP_001140257.1| PREDICTED: similar to Fibrillarin isoform 3 [Pan troglodytes]
 6.0E-90 [81..321] [44..284]
gi|3399667 - gi|3399667|gb|AAC28913.1| FBRL_HUMAN [Homo sapiens]
 6.0E-90 [81..321] [78..318]
gi|30583881, gi|... - gi|60653881|gb|AAX29633.1| fibrillarin [synthetic construct], gi|30583881|gb|AAP36189.1| Homo sapien...
 7.0E-90 [81..321] [81..321]
FBRL_RAT - rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus GN=Fbl PE=1 SV=2
 1.0E-89 [80..321] [86..327]
gi|73948346 - gi|73948346|ref|XP_533671.2| PREDICTED: similar to fibrillarin [Canis familiaris]
 1.0E-89 [81..321] [73..313]

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Predicted Domain #1
Region A:
Residues: [1-83] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPGFSPRGG GFGGRGGFGD RGGRGGRGGF GGGRGRGGGF RGRGRGGGGG GGGGGGGGRG  60
   61 GGGFHSGGNR GRGRGGKRGN QSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.221849
Match: 1y0fA
Description: No description for 1y0fA was found.

Predicted Domain #2
Region A:
Residues: [84-321] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNVMVEPHRH EGVFICRGKE DALVTKNLVP GESVYGEKRV SISEGDDKIE YRAWNPFRSK  60
   61 LAAAILGGVD QIHIKPGAKV LYLGAASGTT VSHVSDIVGP DGLVYAVEFS HRSGRDLINL 120
  121 AKKRTNIIPV IEDARHPHKY RMLIAMVDVI FADVAQPDQT RIVALNAHTF LRNGGHFVIS 180
  181 IKANCIDSTA SAEAVFASEV KKMQQENMKP QEQLTLEPYE RDHAVVVGVY RPPPKVKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 89.154902
Match: 2ipxA
Description: No description for 2ipxA was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle