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View Structure Prediction Details

Protein: CWC25_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 376 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CWC25_SCHPO.

Description E-value Query
Range
Subject
Range
tho2-PA - The gene tho2 is referred to in FlyBase by the symbol Dmel\tho2 (CG31671, FBgn0031390). It is a prot...
186.0 [0..77] [365..1341]
gi|78223250, gi|... - gi|78223250|ref|YP_384997.1| hypothetical protein Gmet_2043 [Geobacter metallireducens GS-15], gi|78...
175.0 [0..143] [364..1828]
gi|47087457, gi|... - gi|49618973|gb|AAT68071.1| pate [Danio rerio], gi|47087457|ref|NP_998627.1| coiled-coil domain conta...
174.0 [0..1] [375..1]
gi|73966167 - gi|73966167|ref|XP_864309.1| PREDICTED: similar to CG2843-PA isoform 2 [Canis familiaris]
159.0 [0..1] [375..1]
CWC25 - CWC25 spliceosome-associated protein homolog (S. cerevisiae)
153.0 [0..1] [375..1]
gi|76644813 - gi|76644813|ref|XP_879326.1| PREDICTED: similar to CG2843-PA isoform 5 [Bos taurus]
152.0 [0..1] [375..1]
gi|114667769 - gi|114667769|ref|XP_511442.2| PREDICTED: coiled-coil domain containing 49 [Pan troglodytes]
152.0 [0..1] [375..1]
gi|3128167, gi|1... - pir||T02376 hypothetical protein At2g44200 [imported] - Arabidopsis thaliana, gi|3128167|gb|AAC1607...
151.0 [0..1] [345..1]
gi|5802901 - gi|5802901|gb|AAD51822.1|AF173019_1 N-type calcium channel alpha-1B cdB8 variant [Gallus gallus]
150.0 [0..105] [314..829]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGGDLNMKK SWHPLLMRNQ EKVWKDEQAH KEEMKRVEQL RREIEEERQL LELHRLQEAA  60
   61 GGKKRKDRVE WMYAVPNTNG PNRDSSEMEE YLLGRRRLDD LLKDKIEDQN NSLEKTEFIA 120
  121 LQNANSLQDT QAKLRLDPLL AIKQQEQKQL QTLMEKRKYS LDSDRKSKE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRHRDRHHRS NQDRSRERSD NEQHSSDKRE HSRRSYRNDR NNWRERTHND RYRHRDKYDS  60
   61 GYFKKHYDDD MRFDQGHFQD ERDLKKYVRT SRQYSRSPSP DFRTRNHQFH SRDSQPITQR 120
  121 HTDIESRLQK MQDNAKELDE SRRKKIELLE KKERDEEQFL EKERRDTARK WDNQGDFIRN 180
  181 MRKEIYSGDS VSLADRVNSS RHNMLRP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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