YRC Public Data Repository - Protein Structure Prediction

Protein:	MUB1_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	574 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MUB1_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|85098706 - gi\|85098706\|ref\|XP_960655.1\| hypothetical protein NCU01252 [Neurospora crassa OR74A] gi\|32412530, gi\|... - gi\|32412530\|ref\|XP_326745.1\| related to samB [MIPS] [Neurospora crassa], gi\|28922167\|gb\|EAA31419.1\| ...	302.0	[0..1]	[525..1]
MUB1_EMENI - MYND-type zinc finger protein samB OS=Emericella nidulans GN=samB PE=3 SV=1 MUB1_EMENI - MYND-type zinc finger protein samB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 ...	299.0	[0..1]	[523..1]
gi\|88183167, gi\|... - gi\|88183167\|gb\|EAQ90635.1\| hypothetical protein CHGG_02570 [Chaetomium globosum CBS 148.51], gi\|1162...	296.0	[0..1]	[525..1]
gi\|145013942, gi... - gi\|39968723\|ref\|XP_365752.1\| hypothetical protein MGG_02454 [Magnaporthe grisea 70-15], gb\|EAA54469....	293.0	[0..1]	[528..1]
MUB1_ASPFU - MYND-type zinc finger protein samB OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 10135... MUB1_ASPFU - MYND-type zinc finger protein samB OS=Aspergillus fumigatus GN=samB PE=3 SV=1	292.0	[0..1]	[524..1]
MUB1_ASPTN - MYND-type zinc finger protein samB OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=samB PE=...	284.0	[0..1]	[524..1]
MUB1_ASPOR - MYND-type zinc finger protein samB OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=samB PE=3 S... MUB1_ASPFN - MYND-type zinc finger protein samB OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 335... MUB1_ASPOR - MYND-type zinc finger protein samB OS=Aspergillus oryzae GN=samB PE=3 SV=1	278.0	[0..1]	[524..1]
gi\|111055496 - gi\|111055496\|gb\|EAT76616.1\| hypothetical protein SNOG_16037 [Phaeosphaeria nodorum SN15]	274.0	[0..1]	[528..1]
gi\|119174516, gi... - gi\|90298405\|gb\|EAS28036.1\| hypothetical protein CIMG_09240 [Coccidioides immitis RS], gi\|119174516\|r...	273.0	[0..1]	[525..1]
gi\|46126157, gi\|... - gi\|46126157\|ref\|XP_387632.1\| hypothetical protein FG07456.1 [Gibberella zeae PH-1], gi\|42554630\|gb\|E...	248.0	[0..1]	[489..1]

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Predicted Domain #1

Region A:
Residues: [1-129]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRESNVSIVW NNKASVTINT VLYDRRALDC DSEMSLMNSL SHLVYLTSTS PKIREILTMD  60
   61 GGLMRLMNIL RAGRGQTFAR MTIWQLALQC VVNVGIRGSE AIRIRVVEAG IVPIVVTLLD 120
  121 DFLFALESV

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [130-373]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSHHSRFQFS LTPSTTPPPS SASAPFPINS NISNSLDSVS QHNSSADSLF VNGDVPSPFG  60
   61 ASTASSSSRR VYSVDLRDSG DVQLPNQSTF RHSVNRDLLG SSSTTSHDRS SGSIYSNDSF 120
  121 QDPRVQANSP LTIQRISSAA PSTPTSTENV NYNMTTPSSP SYSRQTGPAS ETINDEIDSP 180
  181 NFFFPTPLNI MTTTQDSSRD VQLSLNNVQS QALNNRQRRN QLLPGVPSTS ALLDGRRPEN 240
  241 VVDY

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [374-453]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HGIASFFDNF DKKINKLPRE EDILFGLQIL AYTSKNYFHM RPYFESSKDV PSLRMSPLRS  60
   61 GSKTWNIFQL VEQFTLKFYP

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [454-574]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PQVQYWARAI MNNYCRKDES HGGIRRCANL LCNKWEEHSR QFAKCRRCRR TKYCSKECQH  60
   61 QAWPGHSRWC RVIHKDGRNS KRESSKINSV TESESTASPA ASVIPVGTES VTSSTQSDSR 120
  121 L

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	13.045757
Match:	2oddA
Description:	No description for 2oddA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits