| Protein: | AIL6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 581 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIL6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
401.0 | [0..16] | [581..1] |
|
|
296.0 | [0..2] | [581..1] |
|
|
287.0 | [0..2] | [570..1] |
|
|
281.0 | [0..6] | [537..16] |
|
|
258.0 | [0..5] | [576..1] |
|
|
258.0 | [0..8] | [576..37] |
|
Region A: Residues: [1-234] |
1 11 21 31 41 51
| | | | | |
1 MMAPMTNWLT FSLSPMEMLR SSDQSQFVSY DASSAASSSP YLLDNFYGWS NQKPQEFFKE 60
61 EAQLAAAASM ADSTILTTFV DPQSHHSQNH IPKLEDFLGD SSSIVRYSDN SQTDTQDSSL 120
121 TQIYDPRHHH NQTGFYSDHH DFKTMAGFQS AFSTNSGSEV DDSASIGRTH LAGDYLGHVV 180
181 ESSGPELGFH GGSTGALSLG VNVNNNTNHR NDNDNHYRGN NNGERINNNN NNDN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [235-343] |
1 11 21 31 41 51
| | | | | |
1 EKTDSEKEKA VVAVETSDCS NKKIADTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG 60
61 QARKGRQGGY DKEDKAARAY DLAALKYWNA TATTNFPITN YSKEVEEMK
|
| Detection Method: | |
| Confidence: | 7.008774 |
| Match: | PF00847.12 |
| Description: | No description for PF00847.12 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [344-452] |
1 11 21 31 41 51
| | | | | |
1 HMTKQEFIAS LRRKSSGFSR GASIYRGVTR HHQQGRWQAR IGRVAGNKDL YLGTFATEEE 60
61 AAEAYDIAAI KFRGINAVTN FEMNRYDVEA IMKSALPIGG AAKRLKLSL
|
| Detection Method: | |
| Confidence: | 23.39794 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [453-581] |
1 11 21 31 41 51
| | | | | |
1 EAAASSEQKP ILGHHQLHHF QQQQQQQQLQ LQSSPNHSSI NFALCPNSAV QSQQIIPCGI 60
61 PFEAAALYHH HQQQQQHQQQ QQQQNFFQHF PANAASDSTG SNNNSNVQGT MGLMAPNPAE 120
121 FFLWPNQSY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
