YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|71911498, gi\|...
Organism:	Streptococcus pyogenes MGAS5005
Length:	147 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|71911498, gi|....

Description	E-value	Query Range	Subject Range
DTD_THEMA - D-tyrosyl-tRNA(Tyr) deacylase OS=Thermotoga maritima GN=dtd PE=3 SV=1 DTD_THEMA - D-aminoacyl-tRNA deacylase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) ...	240.0	[0..1]	[146..1]
DTD_BACCN - D-aminoacyl-tRNA deacylase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391...	239.0	[0..1]	[145..1]
DTD_STRP6 - D-tyrosyl-tRNA(Tyr) deacylase OS=Streptococcus pyogenes serotype M6 GN=dtd PE=3 SV=1 gi\|56807779 - gi\|56807779\|ref\|ZP_00365634.1\| COG1490: D-Tyr-tRNAtyr deacylase [Streptococcus pyogenes M49 591] DTD_STRPZ - D-aminoacyl-tRNA deacylase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=dtd PE=3 SV=1 DTD_STRP6 - D-aminoacyl-tRNA deacylase OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394) G...	239.0	[0..1]	[147..1]
DTD_GEOSL - D-aminoacyl-tRNA deacylase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=dtd ... DTD_GEOSL - D-tyrosyl-tRNA(Tyr) deacylase OS=Geobacter sulfurreducens GN=dtd PE=3 SV=1	238.0	[0..1]	[145..1]
gi\|47556625, gi\|... - gi\|47566595\|ref\|ZP_00237417.1\| D-tyrosyl-tRNA(tyr) deacylase [Bacillus cereus G9241], gi\|47556625\|gb... gi\|228608376, gi... - gi\|229175080\|ref\|ZP_04302597.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus MM3], gi\|228608376\|gb...	237.0	[0..1]	[145..1]
DTD_STRPC - D-aminoacyl-tRNA deacylase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=dtd PE=3 SV=1	237.0	[0..1]	[147..1]
DTD_THEAQ - D-aminoacyl-tRNA deacylase OS=Thermus aquaticus GN=dtd PE=3 SV=2	237.0	[0..1]	[145..1]
DTD_BACC1 - D-aminoacyl-tRNA deacylase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=dtd PE=3 SV=1 gi\|228585036, gi... - gi\|229198533\|ref\|ZP_04325237.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus m1293], gi\|228585036\|... DTD_BACCQ - D-aminoacyl-tRNA deacylase OS=Bacillus cereus (strain Q1) GN=dtd PE=3 SV=1 gi\|229141145, gi... - gi\|229141145\|ref\|ZP_04269686.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus BDRD-ST26], gi\|228642... gi\|229163354, gi... - gi\|229163354\|ref\|ZP_04291306.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus R309803], gi\|22862013... DTD_BACCZ - D-aminoacyl-tRNA deacylase OS=Bacillus cereus (strain ZK / E33L) GN=dtd PE=3 SV=1 DTD_BACC7 - D-aminoacyl-tRNA deacylase OS=Bacillus cereus (strain AH187) GN=dtd PE=3 SV=1 gi\|228935726, gi... - gi\|228935726\|ref\|ZP_04098539.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus thuringiensis serovar andalo... gi\|206745771, gi... - gi\|206976019\|ref\|ZP_03236929.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus H3081.97], gi\|2067457... gi\|228659249, gi... - gi\|229123947\|ref\|ZP_04253139.1\| D-tyrosyl-tRNA(Tyr) deacylase [Bacillus cereus 95/8201], gi\|22865924...	237.0	[0..1]	[145..1]
gi\|196197553, gi... - gi\|196253057\|ref\|ZP_03151700.1\| D-tyrosyl-tRNA(Tyr) deacylase [Clostridium thermocellum DSM 4150], g... DTD_CLOTH - D-aminoacyl-tRNA deacylase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /...	237.0	[0..1]	[146..1]
DTD_GEOKA - D-aminoacyl-tRNA deacylase OS=Geobacillus kaustophilus (strain HTA426) GN=dtd PE=3 SV=1 DTD_GEOKA - D-tyrosyl-tRNA(Tyr) deacylase OS=Geobacillus kaustophilus GN=dtd PE=3 SV=1	237.0	[0..1]	[145..1]

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Predicted Domain #1

Region A:
Residues: [1-147]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLVLQRVKE ASVSIDGKIA GAINQGLLLL VGVGPDDNAE DLAYAVRKIV NMRIFSDADG  60
   61 KMNQSIQDIK GSILSVSQFT LYADTKKGNR PAFTGAAKPD LASQLYDSFN EQLAEFVPVE 120
  121 RGVFGADMQV SLINDGPVTI ILDTKCH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	61.09691
Match:	1j7gA
Description:	D-Tyr tRNAtyr deacylase, DTD
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits