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View Structure Prediction Details

Protein: gi|61358568, gi|...
Organism: synthetic construct
Length: 116 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|61358568, gi|....

Description E-value Query
Range
Subject
Range
gi|17646142 - gi|17646142|gb|AAL40907.1|AF288810_1 cocaine and amphetamine regulated transcript protein type I pre...
6.0E-51 [1..116] [1..117]
gi|68364222 - gi|68364222|ref|XP_685429.1| PREDICTED: similar to cocaine and amphetamine regulated transcript prot...
9.0E-50 [1..116] [1..117]
gi|114599766 - gi|114599766|ref|XP_001155069.1| PREDICTED: cocaine- and amphetamine-regulated transcript [Pan trogl...
1.0E-44 [1..116] [1..116]
gi|74149156 - gi|74149156|dbj|BAE22382.1| unnamed protein product [Mus musculus]
2.0E-44 [1..116] [1..116]
gi|61368660, gi|... - gi|61368660|gb|AAX43217.1| cocaine- and amphetamine-regulated transcript [synthetic construct], gi|6...
3.0E-44 [1..116] [1..116]
gi|109077541 - gi|109077541|ref|XP_001096906.1| PREDICTED: cocaine- and amphetamine-regulated transcript [Macaca mu...
6.0E-44 [1..116] [1..116]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSRVRLLP LLGAALLLML PLLGTRAQED AELQPRALDI YSAVDDASHE KELIEALQEV  60
   61 LKKLKSKRVP IYEKKYGQVP MCDAGEQCAV RKGARIGKLC DCPRGTSCNS FLLKCL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 89.19382
Match: PF06373.2
Description: No description for PF06373.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.616 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.464 N/A N/A a.1.1 Globin-like
View Download 0.419 N/A N/A a.35.1 lambda repressor-like DNA-binding domains
View Download 0.419 N/A N/A a.61.1 Retroviral matrix proteins
View Download 0.398 N/A N/A a.24.13 Domain of the SRP/SRP receptor G-proteins


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