YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|57167033, gi\|...
Organism:	Campylobacter jejuni RM1221
Length:	154 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|57167033, gi|....

Description	E-value	Query Range	Subject Range
gi\|86556992, gi\|... - gi\|86608450\|ref\|YP_477212.1\| acetolactate synthase 3 regulatory subunit [Synechococcus sp. JA-2-3B'a... gi\|86608450 - gi\|86608450\|ref\|YP_477212.1\| acetolactate synthase, small subunit [Cyanobacteria bacterium Yellowsto...	229.0	[0..1]	[153..1]
gi\|7436727 - gi\|7436727\|pir\|\|S74358 acetolactate synthase ilvN - Synechocystis sp. (strain PCC 6803) gi\|16331478, gi\|... - gi\|16331478\|ref\|NP_442206.1\| acetolactate synthase 3 regulatory subunit [Synechocystis sp. PCC 6803]...	227.0	[0..1]	[153..17]
gi\|86606770 - gi\|86606770\|ref\|YP_475533.1\| acetolactate synthase, small subunit [Cyanobacteria bacterium Yellowsto... gi\|86606770, gi\|... - gi\|86606770\|ref\|YP_475533.1\| acetolactate synthase 3 regulatory subunit [Synechococcus sp. JA-3-3Ab]...	226.0	[0..1]	[153..1]
gi\|134298160, gi... - gi\|88944098\|ref\|ZP_01147431.1\| Acetolactate synthase, small subunit [Desulfotomaculum reducens MI-1]...	224.0	[0..1]	[153..1]
gi\|67921725, gi\|... - gi\|67921725\|ref\|ZP_00515242.1\| Acetolactate synthase, small subunit [Crocosphaera watsonii WH 8501],...	224.0	[0..1]	[153..1]
gi\|33238229, gi\|... - gi\|33240701\|ref\|NP_875643.1\| acetolactate synthase 3 regulatory subunit [Prochlorococcus marinus sub...	224.0	[0..1]	[153..1]
gi\|124026310, gi... - gi\|124026310\|ref\|YP_001015426.1\| acetolactate synthase 3 regulatory subunit [Prochlorococcus marinus... gi\|72002453, gi\|... - gi\|72382603\|ref\|YP_291958.1\| acetolactate synthase 3 regulatory subunit [Prochlorococcus marinus str...	223.0	[0..1]	[153..1]
gi\|88927090, gi\|... - gi\|88949650\|ref\|ZP_01152266.1\| Acetolactate synthase, small subunit [Halorhodospira halophila SL1], ...	223.0	[0..1]	[153..43]
gi\|22298423, gi\|... - gi\|22298423\|ref\|NP_681670.1\| acetolactate synthase 3 regulatory subunit [Thermosynechococcus elongat...	223.0	[0..1]	[153..1]
gi\|87301084, gi\|... - gi\|87301084\|ref\|ZP_01083925.1\| acetolactate synthase III small subunit [Synechococcus sp. WH 5701], ...	223.0	[0..1]	[153..1]

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Predicted Domain #1

Region A:
Residues: [1-154]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVLSVIVL NEHGVLSRIV GLFSGRGYNI DSLTVAPLEN KEFSRINIVT SGNERTFEQI  60
   61 VKQLHKLIPT YKVIESEEFI DKEMALVKIP LNENLGGLDA VLKAYNGTIA NSNENFLFLM 120
  121 VADDANRIDN FLKTIKKYNP SDIVRSGSVL MEIK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	53.69897
Match:	2pc6A
Description:	No description for 2pc6A was found.

Predicted functions:

Term	Confidence	Notes
acetolactate synthase activity	14.1096734416761	bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups	12.4176994384119	bayes_pls_golite062009
catalytic activity	0.645256181736122	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: