YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|57167155, gi\|...
Organism:	Campylobacter jejuni RM1221
Length:	73 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|57167155, gi|....

Description	E-value	Query Range	Subject Range
gi\|57168212, gi\|... - gi\|57168212\|ref\|ZP_00367351.1\| probable acyl carrier protein Cj1304 -related protein [Campylobacter ...	112.0	[0..1]	[73..1]
gi\|85843757, gi\|... - gi\|86152872\|ref\|ZP_01071077.1\| conserved domain protein [Campylobacter jejuni subsp. jejuni HB93-13]...	112.0	[0..1]	[73..1]
gi\|87305223, gi\|... - gi\|87305223\|ref\|ZP_01087378.1\| acyl carrier protein, putative [Campylobacter jejuni subsp. jejuni 81...	111.0	[0..1]	[73..1]
gi\|112804634, gi... - gi\|153951300\|ref\|YP_001397611.1\| putative acyl carrier protein [Campylobacter jejuni subsp. doylei 2...	111.0	[0..1]	[73..1]
gi\|222824301, gi... - gi\|57241500\|ref\|ZP_00369446.1\| probable acyl carrier protein Cj1304 -related protein [Campylobacter ...	79.0	[0..1]	[72..1]

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Predicted Domain #1

Region A:
Residues: [1-73]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKTEFLEEL KEAMHRDEDL NEDMLLDDID EWDSLAFVSV MVLYKNLFTL KITAEDLKNC  60
   61 QKVSDLINLA KLD

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.7
Match:	2cgqA
Description:	No description for 2cgqA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits