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View Structure Prediction Details

Protein: gi|57238029, gi|...
Organism: Campylobacter jejuni RM1221
Length: 68 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|57238029, gi|....

Description E-value Query
Range
Subject
Range
gi|153951059, gi... - gi|153951059|ref|YP_001397743.1| putative cytochrome oxidase maturation protein, cbb3-type [Campylob...
gi|157386384, gi... - gi|157415420|ref|YP_001482676.1| small hydrophobic protein [Campylobacter jejuni subsp. jejuni 81116...
93.0 [0..1] [68..1]
gi|57017098, gi|... - gi|57241906|ref|ZP_00369846.1| small hydrophobic protein Cj1154c -related protein [Campylobacter ups...
86.0 [0..1] [65..1]
gi|57168036, gi|... - gi|57168036|ref|ZP_00367175.1| small hydrophobic protein Cj1154c -related protein [Campylobacter col...
85.0 [0..1] [66..1]
gi|34482475 - gi|34482475|emb|CAE09476.1| hypothetical protein [Wolinella succinogenes]
gi|34556761 - gi|34556761|ref|NP_906576.1| hypothetical protein WS0326 [Wolinella succinogenes DSM 1740]
83.0 [0..1] [60..1]
gi|32262704, gi|... - gi|32266653|ref|NP_860685.1| hypothetical protein HH1154 [Helicobacter hepaticus ATCC 51449], gi|322...
79.0 [0..1] [60..1]
gi|107837300, gi... - gi|108563527|ref|YP_627843.1| cation transport subunit for cbb3-type oxidase [Helicobacter pylori HP...
gi|2314326, gi|1... - gi|2314326|gb|AAD08214.1| predicted coding region HP1163 [Helicobacter pylori 26695], gi|15645777|re...
gi|210135322, gi... - gi|210135322|ref|YP_002301761.1| cation transport subunit for cbb3-type oxidase [Helicobacter pylori...
gi|15612155, gi|... - gi|4155676|gb|AAD06661.1| putative component of cation transport for cbb3-type oxidase [Helicobacter...
gi|7465200 - pir||C64665 probable component of cation transport for cbb3-type oxidase - Helicobacter pylori
gi|207091768 - gi|207091768|ref|ZP_03239555.1| cation transport subunit for cbb3-type oxidase [Helicobacter pylori ...
76.0 [0..1] [59..1]
gi|109947840, gi... - gi|109947840|ref|YP_665068.1| hypothetical protein Hac_1330 [Helicobacter acinonychis str. Sheeba], ...
76.0 [0..1] [60..1]
gi|222538720, gi... - gi|57241792|ref|ZP_00369736.1| small hydrophobic protein Cj1154c -related protein [Campylobacter lar...
74.0 [0..1] [66..1]
gi|78776776, gi|... - gi|78776776|ref|YP_393091.1| cytochrome oxidase maturation protein cbb3-type [Sulfurimonas denitrifi...
61.0 [0..4] [58..5]
gi|112803980, gi... - gi|154173919|ref|YP_001408578.1| hypothetical protein CCV52592_0266 [Campylobacter curvus 525.92], g...
59.0 [0..2] [65..3]

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Predicted Domain #1
Region A:
Residues: [1-68]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSIIMMMIG VSILAFFIIL ATLLWGIKNK QFDDDYKFTT LNDDEDSLRD AIELERRKKE  60
   61 ALDKKRLS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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