YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|222630414, gi...
Organism:	Oryza sativa Japonica Group
Length:	814 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222630414, gi....

Description	E-value	Query Range	Subject Range
PI3K1_SOYBN - Phosphatidylinositol 3-kinase, root isoform OS=Glycine max PE=2 SV=1	670.0	[0..3]	[814..2]
gi\|74418637 - gi\|74418637\|gb\|ABA03135.1\| phosphatidylinositol 3-kinase 1 [Phaseolus vulgaris]	667.0	[0..3]	[814..2]
gi\|27552468 - gi\|27552468\|emb\|CAD56881.1\| phosphatidylinositol 3-kinase [Medicago truncatula]	663.0	[0..3]	[814..2]
gi\|58618123 - gi\|58618123\|gb\|AAW80628.1\| phosphoinositide 3-kinase [Nicotiana tabacum]	658.0	[0..3]	[814..2]
PI3K_ARATH - Phosphatidylinositol 3-kinase VPS34 OS=Arabidopsis thaliana GN=At1g60490 PE=2 SV=2	652.0	[0..3]	[814..2]
gi\|24711346 - gi\|24711346\|gb\|AAN62481.1\| phosphatidylinositol 3-kinase [Brassica napus]	648.0	[0..3]	[814..2]
gi\|73961721 - gi\|73961721\|ref\|XP_547599.2\| PREDICTED: similar to phosphoinositide-3-kinase, class 3 [Canis familia...	630.0	[0..5]	[811..309]

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Predicted Domain #1

Region A:
Residues: [1-814]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANGGEFRFF LSCDISLPLA FRVDRLLHYP TPTQPSPPQD CTTLATNKKV PELVVECKLY  60
   61 IDGIQFGLPV STRLESSGPP YFWNEVMTLT AKYRDLTSLS QLAFTVWDMS SGEDGNIVGG 120
  121 ATIFLFNNKK QLKTGRQKLR LWPQKEADGR VPTTTPGKVP KNERGEIERL ERLVNKHERG 180
  181 QIQHVEWLDR LFFRAMDKAK EKCERTENLY PSLVVEFCSF EHRVVFQESG ANFYAPAPVL 240
  241 LSNQLVTVWD PELGRTNPSE HKQLKLARSL TRGIIDKDLK PSSNERKCLQ RIIKFPPTRS 300
  301 LQVDEKQLVW KFRFSLMSEK KALTKFVRAV DWSDIQEAKQ AVELIRKWET IDVADALELL 360
  361 SPDFESEEVR AYAVNILERA DDEELQCYLL QLVQALRFER SDESCLAHFL VKRAVSNIEI 420
  421 ASFLRWYVVV ELRDTAYARR YYSTYDLLEN GMMKFARDDG DEDGFRLWQS LTRQTELMAQ 480
  481 LGSIMKDVKQ VRGSAQKKID GLRQLLSGVF SELTNFDEPI RSPLAPTVLL TGVIPQESSI 540
  541 FKSALHPLRL AFKTANGGIS KIIYKKGDDL RQDQLVIQMV SLMDRLLKLE NMDLHLTPYR 600
  601 VLATQPDEGM LEFIPSSSLA QILSEHRTIT SYLQKFHPDE DGPFGITAQC LETFIKSCAG 660
  661 YSVITYIMGV GDRHLDNLLL TDDGRLFHVD FAFILGKDPK PFPPPMKLCK EMVEAMGGAE 720
  721 SQYYTRFKSY CCEAYNILRK SSSLILNLFN LMRRSNIPDI TNEENAGLKL QEKFRLDLED 780
  781 EEAIHFFQDL INESVSALFP QMVETIHRWA QYWR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	143.0
Match:	2rd0A
Description:	No description for 2rd0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.2	NCBI nr	03/2009
PSI-BLAST	2.2.22	FFAS	ffas03
PDB	10/2008	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits