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View Structure Prediction Details

Protein: DBP2_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 550 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DBP2_SCHPO.

Description E-value Query
Range
Subject
Range
gi|5270 - gi|5270|emb|CAA36873.1| p68 protein [Schizosaccharomyces pombe]
432.0 [0..1] [550..1]
gi|74210167 - gi|74210167|dbj|BAE21355.1| unnamed protein product [Mus musculus]
379.0 [0..28] [540..78]
gi|114686445 - gi|114686445|ref|XP_525595.2| PREDICTED: DEAD box polypeptide 17 [Pan troglodytes]
379.0 [0..60] [549..206]
gi|62088770 - gi|62088770|dbj|BAD92832.1| DEAD box polypeptide 17 isoform p82 variant [Homo sapiens]
378.0 [0..60] [549..110]
gi|109094275 - gi|109094275|ref|XP_001092491.1| PREDICTED: similar to DEAD box polypeptide 17 isoform p82 [Macaca m...
376.0 [0..60] [549..219]
gi|74354729 - gi|74354729|gb|AAI03319.1| DDX5 protein [Bos taurus]
374.0 [0..28] [540..60]
gi|45382259, gi|... - gi|5114446|gb|AAD40318.1|AF158370_1 DEAD-box RNA helicase [Gallus gallus], gi|45382259|ref|NP_990158...
372.0 [0..45] [535..5]
gi|220947070, gi... - gi|220960420|gb|ACL92746.1| CG10077-PA [synthetic construct], gi|220947070|gb|ACL86078.1| CG10077-PA...
FBpp0305296, CG1... - This gene is referred to in FlyBase by the symbol Dmel\CG10077 (CG10077, FBgn0035720). It is a prote...
372.0 [0..7] [510..45]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYRDNEYSG NYNGKEDGYN SRGRYGGGYR NNYSRGGGRG GFNDGASYGY DQRGQGRNFY  60
   61 ESDGPGANLV KKDWKNETLI PFQKDFYKEH ENVRNRSDAE VTEYRKEKEI VVHGLNVPKP 120
  121 V

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [122-550]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTFEEAGFPN YVLKEVKQLG FEAPTPIQQQ AWPMAMSGRD MVGISATGSG KTLSYCLPAI  60
   61 VHINAQPLLS PGDGPIVLVL APTRELAVQI QQECTKFGKS SRIRNTCVYG GVPRGPQIRD 120
  121 LIRGVEICIA TPGRLLDMLD SNKTNLRRVT YLVLDEADRM LDMGFEPQIR KIVDQIRPDR 180
  181 QTVMFSATWP KEVQRLARDY LNDYIQVTVG SLDLAASHNI KQIVEVVDNA DKRARLGKDI 240
  241 EEVLKDRDNK VLIFTGTKRV ADDITRFLRQ DGWPALAIHG DKAQDERDWV LNEFRTGKSP 300
  301 IMVATDVASR GIDVKGITHV FNYDFPGNTE DYVHRIGRTG RAGAKGTAYT YFTSDNAKQA 360
  361 RELVSILSEA KQDIDPKLEE MARYSSGGRG GNYRRGGYGR GGFRRGGGYG NRNRGFTGSN 420
  421 SAPLARSRW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.045757
Match: 2i4iA
Description: No description for 2i4iA was found.

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