| Protein: | gi|61361754, gi|... |
| Organism: | synthetic construct |
| Length: | 477 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|61361754, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..477] | [1..477] |
|
|
0.0 | [1..477] | [1..477] |
|
|
0.0 | [1..477] | [1..477] |
|
|
0.0 | [1..477] | [1..477] |
|
|
0.0 | [4..477] | [1..474] |
|
|
0.0 | [1..477] | [1..476] |
|
|
0.0 | [1..476] | [1..476] |
|
Region A: Residues: [1-255] |
1 11 21 31 41 51
| | | | | |
1 MANMQGLVER LERAVSRLES LSAESHRPPG NCGEVNGVIA GVAPSVEAFD KLMDSMVAEF 60
61 LKNSRILAGD VETHAEMVHS AFQAQRAFLL MASQYQQPHE NDVAALLKPI SEKIQEIQTF 120
121 RERNRGSNMF NHLSAVSESI PALGWIAVSP KPGPYVKEMN DAATFYTNRV LKDYKHSDLR 180
181 HVDWVKSYLN IWSELQAYIK EHHTTGLTWS KTGPVASTVS AFSVLSSGPG LPPPPPPLPP 240
241 PGPPPLFENE GKKEE
|
| Detection Method: |  |
| Confidence: | 70.69897 |
| Match: | 1tjfA |
| Description: | The crystal structure of the N-terminal domain of CAP indicates variable oligomerisation |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 5.81884714997094 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 4.39652693178112 | bayes_pls_golite062009 |
| adenylate cyclase binding | 2.08284870927262 | bayes_pls_golite062009 |
| binding | 1.8340549733034 | bayes_pls_golite062009 |
| enzyme binding | 1.53072876683435 | bayes_pls_golite062009 |
| protein binding | 0.871734119777931 | bayes_pls_golite062009 |
|
Region A: Residues: [256-320] |
1 11 21 31 41 51
| | | | | |
1 SSPSRSALFA QLNQGEAITK GLRHVTDDQK TYKNPSLRAQ GGQTQSPTKS HTPSPTSPKS 60
61 YPSQK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [321-477] |
1 11 21 31 41 51
| | | | | |
1 HAPVLELEGK KWRVEYQEDR NDLVISETEL KQVAYIFKCE KSTIQIKGKV NSIIIDNCKK 60
61 LGLVFDNVVG IVEVINSQDI QIQVMGRVPT ISINKTEGCH IYLSEDALDC EIVSAKSSEM 120
121 NILIPQDGDY REFPIPEQFK TAWDGSKLIT EPAEIMA
|
| Detection Method: | |
| Confidence: | 75.522879 |
| Match: | 1k8fA |
| Description: | C-terminal domain of adenylylcyclase associated protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 4.94933252861141 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 4.21664682046338 | bayes_pls_golite062009 |
| actin monomer binding | 2.04365563273836 | bayes_pls_golite062009 |
| binding | 1.57578562719958 | bayes_pls_golite062009 |
| adenylate cyclase binding | 1.13353932343086 | bayes_pls_golite062009 |
| enzyme binding | 0.705135358375 | bayes_pls_golite062009 |
| protein binding | 0.651719649953198 | bayes_pls_golite062009 |
