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View Structure Prediction Details

Protein: gi|123995831, gi...
Organism: synthetic construct
Length: 299 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|123995831, gi....

Description E-value Query
Range
Subject
Range
gi|109507564 - gi|109507564|ref|XP_001054818.1| PREDICTED: similar to Peroxisomal biogenesis factor 19 (Peroxin-19)...
0.0 [6..299] [213..506]
gi|61369573, gi|... - gi|61369580|gb|AAX43354.1| peroxisomal biogenesis factor 19 [synthetic construct], gi|61369573|gb|AA...
3.0E-95 [1..299] [1..299]
gi|90076598 - gi|90076598|dbj|BAE87979.1| unnamed protein product [Macaca fascicularis]
gi|109017646 - gi|109017646|ref|XP_001117501.1| PREDICTED: similar to peroxisomal biogenesis factor 19 isoform 3 [M...
7.0E-95 [1..299] [1..299]
PEX19_PONAB - Peroxisomal biogenesis factor 19 OS=Pongo abelii GN=PEX19 PE=2 SV=1
PEX19_PONPY - Peroxisomal biogenesis factor 19 - Pongo pygmaeus (Orangutan)
1.0E-93 [1..299] [1..299]
PEX19_MOUSE - Peroxisomal biogenesis factor 19 OS=Mus musculus GN=Pex19 PE=1 SV=1
2.0E-93 [1..299] [1..299]

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Predicted Domain #1
Region A:
Residues: [1-177]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAEEGCSV GAEADRELEE LLESALDDFD KAKPSPAPPS TTTAPDASGP QKRSPGDTAK  60
   61 DALFASQEKF FQELFDSELA SQATAEFEKA MKELAEEEPH LVEQFQKLSE AAGRVGSDMT 120
  121 SQQEFTSCLK ETLSGLAKNA TDLQNSSMSE EELTKAMEGL GMDEGDGEGN ILPIMQS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [178-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IMQNLLSKDV LYPSLKEITE KYPEWLQSHR ESLPPEQFEK YQEQHSVMCK ICEQFEAETP  60
   61 TDSETTQKAR FEMVLDLMQQ LQDLGHPPKE LAGEMPPGLN FDLDALNLSG PPGASGEQCL 120
  121 IM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle