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View Structure Prediction Details

Protein: par-2
Organism: Caenorhabditis elegans
Length: 582 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for par-2.

Description E-value Query
Range
Subject
Range
gi|675507 - gi|675507|gb|AAA62312.1| par-2
1178.0 [0..1] [582..1]

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Predicted Domain #1
Region A:
Residues: [1-130]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDLDTSSAQ IRASQSDLSI ANSSPRLLES NATTSTACIN DVQQPVRRDL SSELLCPLCD  60
   61 QLFDRMVRKL KNQENIESSY DDLFICEEKL QKAPTPPISE EIPAQKMTRS LSQRSKRRLF 120
  121 FSIAGPTICS 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [131-274]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPITPHRRRP LSPSARPAKS SLKIPPEPLN HSLSPPGFHN SHHHRDDSLV LAGGNFRRNG  60
   61 FGRRSERFTA ATTSAQSFAE SSQISTGNSS KIDDESDGTK LKRNSFLRRS LNAFRSKSSG 120
  121 KEQKSFRVFA QIPEHPTEHH DVPE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [275-427]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDVEHLLPEK PTKSSIRSLW KRLFMPKKVS KVSPAAVQLL SQSPSTTDER SHHHTTISFV  60
   61 RLENEHDDPE YDEPLQLSKF SALGYYTGIG RKFERVASGC EITLVVFGHS GAGKTTFVRA 120
  121 IRQLFLEGTD RIRIIPIAER YRLAGIGMMP FPE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [428-582]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDNRLPHIVS MVLNNDETDM EYVLDIIDPE YDNSNLPQAY MDACDAAYLL VDTRNPASIL  60
   61 SAHQIHRNMK HAQHIHVQCE MLMNVPSEAS GQTRVLSANA LETTMKTIPI RDVCANQLDK 120
  121 GVVEEMLLSI CERVTTARNP QTPTSSPIAT SSSPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle