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View Structure Prediction Details

Protein: gi|19115177
Organism: Schizosaccharomyces pombe 972h-
Length: 667 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19115177.

Description E-value Query
Range
Subject
Range
gi|109508259, gi... - gi|109509029|ref|XP_001079503.1| PREDICTED: similar to Protein FKSG26 [Rattus norvegicus], gi|109508...
713.0 [0..12] [598..1]
gi|167773407 - gi|167773407|gb|ABZ92138.1| transcription factor 25 (basic helix-loop-helix) [synthetic construct]
TCF25 - transcription factor 25 (basic helix-loop-helix)
705.0 [0..12] [598..1]
gi|74181406, gi|... - gi|74220156|dbj|BAE31265.1| unnamed protein product [Mus musculus], gi|74212538|dbj|BAE31009.1| unna...
695.0 [0..12] [598..1]
gi|109129525 - gi|109129525|ref|XP_001090795.1| PREDICTED: similar to NULP1 isoform 3 [Macaca mulatta]
686.0 [0..12] [632..1]

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Predicted Domain #1
Region A:
Residues: [1-498]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYFLLPQTI LMSSRALRKL QRQRQTELLE EALDSESDED DEFSSTSGKK VVNVFEILEK  60
   61 ENNAINSEAE KSVSEEEQDE PLVEGESPIV STNKKAKNKK KKKKQQKKKK VTGKRDLDNQ 120
  121 SSDNEKLEGL ESSKNIDDDI DEIEKAAAEL KLKYREQDQV EHVAGVEESA TIPLDKELDE 180
  181 KLNKLLGVNI SMLNPDLEIR KIFGRIVEKR SVNARHDNLR RKRHVLVQPQ EGWPPLVRSG 240
  241 LGMKLTGQSQ DLECFFEITQ SRAYQEVQET FEYYVQTYDP NNLLMLLRSH PFHIDTLLQV 300
  301 SEIIDQQGDH ELSAELVARG LYAFDSILHP RFNLATGATR LPFAIPSNRR LFLCIWRYLQ 360
  361 SLQSRGCWRT VFEFCKALLQ FDMSDPYAIG TCIDIYALRR REFAWIIDFA NYLENSNKIS 420
  421 DTPNMLYSSA LAMFYVHGDT TDTRASMLAA FERAPYMLSE LLDTLNISFT KSSIPSPQDP 480
  481 VQELHSAMYA LYAKDSWS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.34
Match: 2gw1A
Description: No description for 2gw1A was found.

Predicted Domain #2
Region A:
Residues: [499-667]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPTVLAFINS ILEKETVTLH DVEGQFAELT ENLSRRVILL NEQSLRKFLP QRILQGTILS  60
   61 FDPLPPDTYL SESQVFGRDI SRRIASFLSD YLSRAREVNE NEEEPPAHEF DLPPAEQLLQ 120
  121 QIESEVGEES EDGTPVMTRL RSFFGSLFTS TNSETEPAEE STEEMGQGD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle