YRC Public Data Repository - Protein Structure Prediction

Protein:	MIM1_NEUCR
Organism:	Neurospora crassa OR74A
Length:	130 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MIM1_NEUCR.

Description	E-value	Query Range	Subject Range
gi\|145010890, gi... - gi\|39940714\|ref\|XP_359894.1\| hypothetical protein MGG_04883 [Magnaporthe grisea 70-15], gb\|EAA52191....	200.0	[0..1]	[130..1]
gi\|159126094 - gi\|159126094\|gb\|EDP51210.1\| conserved hypothetical protein [Aspergillus fumigatus A1163] gi\|70984950, gi\|... - gi\|70984950\|ref\|XP_747981.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668456...	189.0	[0..1]	[130..1]
gi\|114189520, gi... - gi\|115433062\|ref\|XP_001216668.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	180.0	[0..1]	[130..1]
gi\|169776513 - gi\|169776513\|ref\|XP_001822723.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|220691653, gi... - gi\|238503219\|ref\|XP_002382843.1\| mitochondrial import protein, putative [Aspergillus flavus NRRL3357... gi\|83771458 - gi\|83771458\|dbj\|BAE61590.1\| unnamed protein product [Aspergillus oryzae]	180.0	[0..1]	[130..1]
gi\|42551515, gi\|... - gi\|46122971\|ref\|XP_386039.1\| hypothetical protein FG05863.1 [Gibberella zeae PH-1], gi\|42551515\|gb\|E...	178.0	[0..1]	[130..90]
gi\|88178794, gi\|... - gi\|88178794\|gb\|EAQ86262.1\| hypothetical protein CHGG_07515 [Chaetomium globosum CBS 148.51], gi\|1161...	153.0	[0..1]	[91..1]
gi\|50424763, gi\|... - gi\|50424763\|ref\|XP_460971.1\| hypothetical protein DEHA0F15147g [Debaryomyces hansenii CBS767], gi\|49...	130.0	[0..3]	[101..45]
gi\|190407317 - gi\|190407317\|gb\|EDV10584.1\| hypothetical protein SCRG_01375 [Saccharomyces cerevisiae RM11-1a] MIM1_YEAST - Mitochondrial import protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MIM1 PE=1... MIM1 - Mitochondrial outer membrane protein, required for assembly of the translocase of the outer membrane... gi\|151945604 - gi\|151945604\|gb\|EDN63845.1\| mitochondrial outer membrane protein [Saccharomyces cerevisiae YJM789]	122.0	[0..19]	[101..12]
gi\|111060582, gi... - gi\|169616063\|ref\|XP_001801447.1\| hypothetical protein SNOG_11203 [Phaeosphaeria nodorum SN15], gi\|11...	121.0	[0..7]	[94..4]
gi\|49525334 - gi\|49525334\|emb\|CAG58951.1\| unnamed protein product [Candida glabrata] gi\|50287195, gi\|... - gi\|50287195\|ref\|XP_446027.1\| unnamed protein product [Candida glabrata], gi\|49525334\|emb\|CAG58951.1\|...	121.0	[0..50]	[125..34]

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Predicted Domain #1

Region A:
Residues: [1-130]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEEISNPL AESGVTISSD SEQYSAPESA SPQSPSSSSP AVVLYQPPTV WSLFRSAVIN  60
   61 LFLPFVNGMM LGFGELFAHE AAFRLGWSNT KVFPVSRRDA RPIGPGVEVV ERPRRRVDLD 120
  121 DHLDELTSLE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	53.49485
Match:	PF08219.2
Description:	No description for PF08219.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.248	0.249	mitochondrial outer membrane	a.3.1	Cytochrome c
View	Download	0.222	0.033	mitochondrial outer membrane	a.27.1	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View	Download	0.204	0.027	mitochondrial outer membrane	a.40.1	Calponin-homology domain, CH-domain

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits