| Protein: | Ih-PB |
| Organism: | Drosophila melanogaster |
| Length: | 1290 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Ih-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
963.0 | [0..1] | [1290..1] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MHVKHTQRRV SGPGAFGTFT NDQRASRDNL CPDNQQQQQQ RHSHSHQHLV RQSLVSLSNG 60
61 QPAASAAPDS VSLLRAGDDQ QQHPQQPHLQ QQQQQQQHLQ QQQQRHRSSS SRLSTSGISK 120
121 QNSSDSRSGL RILDS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [136-331] |
1 11 21 31 41 51
| | | | | |
1 SHSPVSCGTQ SVSSTGGQSA LYDACHEYSR SLSAAAAEGA ASLLKSHYSD QQLAQTEPDP 60
61 EPDPERDRDR DRDRDRDRER ERRHLTNLNL NLSSEYDYSG SDKQQLVNET YIFKCIANSP 120
121 SFLRTNKIKE QSKKLRNLSL KTRTAKKKGQ IISKSNAVSD NSLHPGDKYL NLYLVEKKHS 180
181 LQPQVASTSS SINTTH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [332-428] |
1 11 21 31 41 51
| | | | | |
1 PQASSAPASS SSTCTKAPQL PALSAVAARQ QQLLLNGSLK GKGQSQSQGQ SRQTLPGHRA 60
61 SVRSESGSGS SHTIPATGKS PPVPHSLAAK ISSSASG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [429-602] |
1 11 21 31 41 51
| | | | | |
1 SKNCNLLSAS SNSCHKLNAH AQGSGAGSGS GSGSGSGPPG HSHYAAASPK SSVSSNGHLN 60
61 KYCLTDLTRR KAEFNRQLSA PTDYTHHSSS NGSQQEGSSE ANEGHEPVGE STITVASAGV 120
121 SYPHPYSYPY HYAHHASSAT APANLKASLQ LHSFGSHHPC PYPARPTSTS CTNS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [603-713] |
1 11 21 31 41 51
| | | | | |
1 FNRRHIRRHK GKLGDRLLSG DSEESVRCSY CSVLNVNDND LRISFENTCT DSLVTAFDDE 60
61 ALLICDQGTE MVHFDDVSLY GTPKEEPMPN IPIVSEKVSA NFLKSQLQSW F
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [714-750] |
1 11 21 31 41 51
| | | | | |
1 QPTDNRLAMK LFGSRKALVK ERIRQKTSGH WVIHPCS
|
| Detection Method: | |
| Confidence: | 33.823909 |
| Match: | PF08412.1 |
| Description: | No description for PF08412.1 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [751-1090] |
1 11 21 31 41 51
| | | | | |
1 SFRFYWDLCM LLLLVANLII LPVAISFFND DLSTRWIAFN CLSDTIFLID IVVNFRTGIM 60
61 QQDNAEQVIL DPKLIAKHYL RTWFFLDLIS SIPLDYIFLI FNQDFSDSFQ ILHAGRALRI 120
121 LRLAKLLSLV RLLRLSRLVR YVSQWEEVYF LNMASVFMRI FNLICMMLLI GHWSGCLQFL 180
181 VPMLQGFPSN SWVSINELQE SYWLEQYSWA LFKAMSHMLC IGYGRFPPQS LTDMWLTMLS 240
241 MISGATCYAL FLGHATNLIQ SLDSSRRQYR EKVKQVEEYM AYRKLPRDMR QRITEYFEHR 300
301 YQGKFFDEEL ILGELSEKLR EDVINYNCRS LVASVPFFAN
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1091-1290] |
1 11 21 31 41 51
| | | | | |
1 ADSNFVSDVV TKLKYEVFQP GDIIIKEGTI GTKMYFIQEG VVDIVMANGE VATSLSDGSY 60
61 FGEICLLTNA RRVASVRAET YCNLFSLSVD HFNCVLDQYP LMRKTMETVA AERLNKIGKN 120
121 PNIMHQKDEQ LSNPESNTIT AVVNALAAEA DDCKDDDMDL KENLLHGSES SIAEPVQTIR 180
181 EGLPRPRSGE FRALFEGNTP
|
| Detection Method: | |
| Confidence: | 37.221849 |
| Match: | 1q3eA |
| Description: | HCN2J 443-645 in the presence of cGMP |
Matching Structure (courtesy of the PDB): |
|
