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View Structure Prediction Details

Protein: Dyb-PE
Organism: Drosophila melanogaster
Length: 670 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dyb-PE.

Description E-value Query
Range
Subject
Range
DTNB_RAT - Dystrobrevin beta OS=Rattus norvegicus GN=Dtnb PE=1 SV=2
511.0 [0..3] [614..12]

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Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELEPRVAIL QDLRLQTFDS IRFASYRTAS KLRYIQKSTN LHLVDIWNVI EAFRENGLNT  60
   61 LEPQSEVSVA RLETLVSSLY HNLNKRLPTA QQVPVDSKAG LLLNWLLAAY TSDNSGKIRV 120
  121 FSIKVALATM CSGKLVDKLR YIFSQISDGA GQLVAWKLGE FLREVLALPA AVYESPTFHY 180
  181 KEGLEEEIFP AENKVTVNDF MATLMSEPGP SCLVWLPLVH RLATVET

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.09691
Match: 1eg3A
Description: Dystrophin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [228-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IVHPTVCSVC HKENFTGFRY RCQRCHAYQL CQECFWHGKT SLNHQN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.522879
Match: 2e5rA
Description: No description for 2e5rA was found.

Predicted Domain #3
Region A:
Residues: [274-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHEVKEYSSY KSPSKQIGHS LRKSFRCVPE KTVQVLPRFP DQPEKTLNLS HIVPPSPLPS  60
   61 HNGFSDPSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.39794
Match: 2tmaA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [343-670]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVHGHHGPHP GLPGQHGLFD RSSTLDSRAT GRSLDSASGT AGTTMSRVAA ASANDEEHRL  60
   61 IARYAARLAQ ENRAPSNLPD NATPIGTDNS RAQRELIAQL ESKNKEIMRE IARLRRQQET 120
  121 EQMAPENPAL INELRALRQR KGELEGHLGA LQDSRRQLME QLEGLMRMLK NQQTASPRST 180
  181 PNSSPRSGKS PPMPGGAGIL GTSPMSALHA QQMQQHPMAG GVRASQQQLL QQQQQQAHGH 240
  241 GPFSQSQLEQ LNQISSDMRS AFAANGSATP PPMRTTTATA NVSAIPSLNP ISNQNPNLNP 300
  301 DAELNEAADH LTSAISHMVS DLNAGKCE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle