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View Structure Prediction Details

Protein: CG33958-PA
Organism: Drosophila melanogaster
Length: 710 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG33958-PA.

Description E-value Query
Range
Subject
Range
gi|108743681 - gi|108743681|gb|ABG02149.1| IP04501p [Drosophila melanogaster]
574.0 [0..1] [710..1]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNGKAHKSG ENPDPSPCPA GGSRMPTPSV KIDISTCQSN RPMESRTAPD DVNPSGEGGL  60
   61 LLVPTHHNLQ LDKISVRSIS SEDISNGGSG RCCNAAARNP AIKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 1dp4A
Description: Hormone binding domain of the atrial natriuretic peptide receptor
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [105-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRRLQLMQMI ILPFIPILAL IVQTSVTLQE ILEYRSAVAD IETQVTIATD LGKVVTRLQL  60
   61 ERSEVAFYIF TNGSKQRANL TLRFANTDHA LNNMTTWSEI SVPTAPDEDE DDREMMLNRY 120
  121 EFQSRLNEFR DRVRLEPEES SITEVMNWYT SINRGLLHHL SEQIKETDNS GVWRYLVGFK 180
  181 NLLKSIECQN IATSFGIRYY GRGSLTAENF VSYVRYEFMA REMINSTLNY APMLKNMYTN 240
  241 ITSTKKFHRA KQMGTTLLKN NPNVSNERSA IEYYELMNNY TDDLRILQKA LRRLIKEYVD 300
  301 KTLVEADRKE AIGIAILVVV LIVSPVIIVL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.30103
Match: 2dq7X
Description: No description for 2dq7X was found.

Predicted Domain #3
Region A:
Residues: [435-710]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKNAAATIQL YALNLSQKAK ELKREKRKSD SLLFQMLPPS VAMQLKQTQQ VPAELYEAVT  60
   61 IYFSDIVGFT EIAADCTPLE VVTFLNSIYR VFDERIECYD VYKVETIGDS YMVASGLPVK 120
  121 NGNKHISEIA TMALDLLDAS SVFRIPRAGD EFVQIRCGVH TGPVVAGIVG TKMPRYCLFG 180
  181 DTVNTASRME STGEAQKIHI TEEMHDSLQQ VGGFRTEHRG LIDVKGKGLM STYWLTCKDG 240
  241 PVRAREEISW RADIQPVFLD HLKLHPPTDY KLPKRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.69897
Match: 1yk9A
Description: Crystal structure of a mutant form of the mycobacterial adenylyl cyclase Rv1625c
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle