YRC Public Data Repository - Protein Structure Prediction

Protein:	TIM10_ASHGO
Organism:	Ashbya gossypii ATCC 10895
Length:	89 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TIM10_ASHGO.

Description	E-value	Query Range	Subject Range
gi\|50766075 - gi\|50766075\|ref\|XP_422986.1\| PREDICTED: similar to translocase of inner mitochondrial membrane 10 ho...	101.0	[0..6]	[87..115]
TIM10_KLULA - Mitochondrial import inner membrane translocase subunit TIM10 OS=Kluyveromyces lactis (strain ATCC 8... TIM10_KLULA - Mitochondrial import inner membrane translocase subunit TIM10 OS=Kluyveromyces lactis GN=TIM10 PE=3 ...	99.0	[0..1]	[89..1]
gi\|73955150 - gi\|73955150\|ref\|XP_854099.1\| PREDICTED: similar to Mitochondrial import inner membrane translocase s...	96.0	[0..1]	[86..166]
gi\|87248623, gi\|... - gi\|87248623\|gb\|ABD36364.1\| mitochondrial intermembrane space translocase subunit Tim10 [Bombyx mori]...	96.0	[0..6]	[85..2]
TIM10_PICSO - Mitochondrial import inner membrane translocase subunit Tim10 OS=Pichia sorbitophila (strain ATCC MY... TIM10_MILFA, TIM... - Mitochondrial import inner membrane translocase subunit Tim10 OS=Pichia farinosa GN=TIM10 PE=3 SV=1,...	95.0	[0..1]	[88..1]
TIM10_YARLI - Mitochondrial import inner membrane translocase subunit TIM10 OS=Yarrowia lipolytica (strain CLIB 12... TIM10_YARLI - Mitochondrial import inner membrane translocase subunit TIM10 OS=Yarrowia lipolytica GN=TIM10 PE=3 S...	94.0	[0..1]	[75..1]
gi\|114195880, gi... - gi\|115388581\|ref\|XP_001211796.1\| mitochondrial import inner membrane translocase subunit tim10 [Aspe...	94.0	[0..2]	[87..3]
TIM10_NEUCR - Mitochondrial import inner membrane translocase subunit tim10 OS=Neurospora crassa (strain ATCC 2469... IM10_NEUCR, TIM1... - Mitochondrial import inner membrane translocase subunit tim-10 OS=Neurospora crassa GN=tim-10 PE=1 S...	94.0	[0..1]	[89..1]
TIM10_ASPFU - Mitochondrial import inner membrane translocase subunit tim10 OS=Aspergillus fumigatus GN=tim10 PE=3... TIM10_ASPFU - Mitochondrial import inner membrane translocase subunit tim10 OS=Neosartorya fumigata (strain ATCC M... gi\|159130673 - gi\|159130673\|gb\|EDP55786.1\| mitochondrial intermembrane space translocase subunit Tim10, putative [A... gi\|119496885, gi... - gi\|119496885\|ref\|XP_001265216.1\| mitochondrial intermembrane space translocase subunit Tim10, putati...	92.0	[0..2]	[89..3]
TIM10_EMENI, IM1... - Mitochondrial import inner membrane translocase subunit tim10 OS=Emericella nidulans GN=tim10 PE=3 S... TIM10_EMENI - Mitochondrial import inner membrane translocase subunit tim10 OS=Emericella nidulans (strain FGSC A4...	91.0	[0..2]	[77..3]

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Predicted Domain #1

Region A:
Residues: [1-89]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGLGGQPQL SSQQKIAAAE AELDLVTDMF NKLVSNCHRK CIDMNYNEGD LNKNESNCLD  60
   61 RCVAKYFETN VKVGENMQQL GQNFSPGKF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.69897
Match:	2bskB
Description:	Crystal structure of the TIM9 Tim10 hexameric complex
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits