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View Structure Prediction Details

Protein: CheB98a-PA
Organism: Drosophila melanogaster
Length: 193 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CheB98a-PA.

Description E-value Query
Range
Subject
Range
CheB38c-PA - The gene Chemosensory protein B 38c is referred to in FlyBase by the symbol Dmel\CheB38c (CG14405, F...
261.0 [0..1] [193..1]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAKIIILAL VSLFYKANGA FYELSVADEE IFSSCPNPEP GTLDIHGLFD FSEFSTSLEA  60
   61 DGLTVSGNQT LVWDIQRGDR VQLFYFDRGT WTSTAFSILS QDFCKTMYDK SNVLYEPWTG 120
  121 HVMNDVKDQC INAPGTKLIL DTYFLSLSAS VTVPLREGRY KTTIKFRAFD SKGTERPTSI 180
  181 CCEVIGDVFK IRN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.59
Match: 2agcA
Description: Crystal Structure of mouse GM2- activator Protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle