YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD3_ASHGO
Organism:	Ashbya gossypii ATCC 10895
Length:	85 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD3_ASHGO.

Description	E-value	Query Range	Subject Range
gi\|114195380, gi... - gi\|115387581\|ref\|XP_001211296.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	114.0	[0..2]	[79..86]
gi\|39978223, gi\|... - gi\|39978223\|ref\|XP_370499.1\| hypothetical protein MG06996.4 [Magnaporthe grisea 70-15], gb\|EAA55339....	114.0	[0..3]	[76..55]
gi\|169775255 - gi\|169775255\|ref\|XP_001822095.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83769958 - gi\|83769958\|dbj\|BAE60093.1\| unnamed protein product [Aspergillus oryzae]	112.0	[0..2]	[76..23]
gi\|46107530, gi\|... - gi\|46107530\|ref\|XP_380824.1\| hypothetical protein FG00648.1 [Gibberella zeae PH-1], gi\|42545535\|gb\|E...	105.0	[0..3]	[76..13]
DAD3_KLULA - DASH complex subunit DAD3 OS=Kluyveromyces lactis GN=DAD3 PE=3 SV=1 DAD3_KLULA - DASH complex subunit DAD3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 12...	100.0	[0..1]	[83..1]
gi\|67515723, gi\|... - gi\|67515723\|ref\|XP_657747.1\| hypothetical protein AN0143.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	100.0	[0..3]	[75..36]
gi\|169623494, gi... - gi\|169623494\|ref\|XP_001805154.1\| hypothetical protein SNOG_14989 [Phaeosphaeria nodorum SN15], gi\|11...	96.0	[0..2]	[78..19]
gi\|85080092 - gi\|85080092\|ref\|XP_956477.1\| hypothetical protein NCU01799 [Neurospora crassa OR74A] gi\|28917543, gi\|... - gi\|32415517\|ref\|XP_328238.1\| predicted protein [Neurospora crassa], gi\|28917543\|gb\|EAA27241.1\| conse...	96.0	[0..3]	[76..15]
DAD3_CANAL - DASH complex subunit DAD2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DAD3 PE=3 SV=1 DAD3_CANAL - DASH complex subunit DAD2 OS=Candida albicans GN=DAD3 PE=3 SV=1	96.0	[0..2]	[82..22]

Back

Predicted Domain #1

Region A:
Residues: [1-85]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDALSTLQR SVLEKYRTLA DCLHELNDTL VELNTDSDTN PEQVLAQMRE IEVKIALVGT  60
   61 LLKGSVYSLV LQRNMGKQAP GGKAK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	42.346787
Match:	PF08656.1
Description:	No description for PF08656.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits