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View Structure Prediction Details

Protein: CheB93a-PA
Organism: Drosophila melanogaster
Length: 200 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CheB93a-PA.

Description E-value Query
Range
Subject
Range
CheB53b-PA - The gene Chemosensory protein B 53b is referred to in FlyBase by the symbol Dmel\CheB53b (CG33524, F...
278.0 [0..1] [196..1]

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Predicted Domain #1
Region A:
Residues: [1-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCETSVLCT LLIFFQIIGR SFEMSHDFVP IKDDLLSKCE DKPEMGYLDA FVDLSNFSRK  60
   61 RGPGGVNISG NITTIWDVDP SDVVEIDVSI LKFEGDKWIP TIIKGNVKDF CKSFYDKNTL 120
  121 YYSYSTKHVV NKKEAKEKCI TTPGAILLWE PYLLKISFSY AVPLNVGRHK AVLIFTAIDK 180
  181 AGVKRDRDIC MEIVGDIVNA 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.4
Match: 2agcA
Description: Crystal Structure of mouse GM2- activator Protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle