| Protein: | lig3-PA |
| Organism: | Drosophila melanogaster |
| Length: | 806 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lig3-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
633.0 | [0..9] | [790..246] |
|
Region A: Residues: [1-633] |
1 11 21 31 41 51
| | | | | |
1 MLLSRLTWQA RILTRLLCNK MASKGLHNED NKLDTFRRIC DEIAGESSYL KKAERLQRFF 60
61 EKGSSGKGFK GDTVLWVQFL IPAANQRVYN LQNKALIKLF SRIFNADQQQ MHLDLEQDGD 120
121 VSETLRKHFA ASKKLKPQKQ SKLYLQEVEE MLLHLVERTK EDEQTDLLQK LCSKATDLDL 180
181 RTFIRLVKHD LRINARARHI LDAFGPDAYP AYQSSRDLVA IVEQFATKEN KNYASSPVKK 240
241 TKKTSSSAIQ VMTPISPMLA SPCKSVEDAF KKSPTGLYSE IKYDGERVQI HKQGNDFKFF 300
301 SRNLKPVVDH KIRALKKYIP QAFPGGGEMI LDSEIILVDT DTGALLPFGS LGAHKKQTFA 360
361 NAAVCLFVFD CILYDGEDLT QLPFRKRREI LEQNIQPIKS HVQLSESEFL KTTRELAAMT 420
421 ARVLHANLEG VVLKSPTSTY QPGKRNWLKV KKDYLFDGKM ADTADLVVLG AWYGSGKKGG 480
481 TLSIFLMGCY DAFGRLWKTV TKVHSGLDDA TNAEVHKSLI KLTERADANA IPSWLLCSKS 540
541 LVPDVLAKDP MKMPVWEITG AEFTKSDAHT ASGISVRFPR ITRRRSDKSA KEANDLAHLE 600
601 DLFEASKSNV NVDLLLANCS KDETAMNNKT TPE
|
| Detection Method: |  |
| Confidence: | 144.0 |
| Match: | 1x9nA |
| Description: | Crystal Structure of Human DNA Ligase I bound to 5'-adenylated, nicked DNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.62364941193231 | bayes_pls_golite062009 |
| ligase activity | 0.85267344624274 | bayes_pls_golite062009 |
| ligase activity, forming phosphoric ester bonds | 0.81722565837488 | bayes_pls_golite062009 |
| DNA ligase activity | 0.712397444123471 | bayes_pls_golite062009 |
|
Region A: Residues: [634-806] |
1 11 21 31 41 51
| | | | | |
1 KEKKLNGNQS NGSKKLKRSN TGSDDEDGAP VLSKRKESKA IRSLSPSQKG LKDFFKPSKE 60
61 FKSVVKKEPK EDEGNIESTS SKPQLFEGLV AHFAMEKDSS KLMQQFSQHG GCCTTEPQKA 120
121 DLVFYANTNE ALDLEKLRTL YRRSCRHLNV SWLQSCLDTQ SRQPFPLHAV MMK
|
| Detection Method: | |
| Confidence: | 27.30103 |
| Match: | 2faoA |
| Description: | No description for 2faoA was found. |
