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View Structure Prediction Details

Protein: CG4095-PA
Organism: Drosophila melanogaster
Length: 503 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4095-PA.

Description E-value Query
Range
Subject
Range
gi|91084043 - gi|91084043|ref|XP_967085.1| PREDICTED: similar to AGAP001884-PA [Tribolium castaneum]
577.0 [0..7] [503..2]

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Predicted Domain #1
Region A:
Residues: [1-503]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKQNNGLHL ARRNLWVVCS GLRAKDCDSG GKGGKGKENG KFRTEKDTFG ELKVPADKLY  60
   61 GAQTMRSKLN FPIGDIGERM PMPVIQAMGI LKKACAEVNK DYGLDGKVSD AVSCACDDVI 120
  121 SGKLYKQGHF PLVIWQTGSG TQTNMNTNEV ISNAAIKMMG GELGSKKPVH PNDHVNKSQS 180
  181 SNDTFPTAIH ISVGMELNER LVPAVTHLRD ALKSKSDEFK DIIKIGRTHL MDAVPLTLGQ 240
  241 EFSGYTQQLT NGLERIKGCL PRVYELALGG TAVGTGLNTR KGFAEKVAKR ISELTCLPFV 300
  301 SAPNKFEALA ARDAMVEVHG VLNTIAVSLM KIANDIRLLG SGPRCGLGEL MLPENEPGSS 360
  361 IMPGKVNPTQ CESMTMLCAQ VMGNQVAVTI GGSNGHFELN VFKPLVVSNV LRSIRLLADG 420
  421 SMTFSKNCVE GLQANKERID KIMNESLMLV TALNPHIGYD KAALIAKTAH KNKTTLKEEA 480
  481 LKTGITEEQF KEWVNPKEML GPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 154.0
Match: 1yfmA
Description: RECOMBINANT YEAST FUMARASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
fumarate hydratase activity 4.22589182982073 bayes_pls_golite062009
catalytic activity 2.51282259572665 bayes_pls_golite062009
lyase activity 2.31268471569846 bayes_pls_golite062009
carbon-nitrogen lyase activity 2.2046475419807 bayes_pls_golite062009
histidine ammonia-lyase activity 0.948129236753279 bayes_pls_golite062009
amidine-lyase activity 0.901614580251298 bayes_pls_golite062009
binding 0.854855116369286 bayes_pls_golite062009
argininosuccinate lyase activity 0.617974375213548 bayes_pls_golite062009
ammonia-lyase activity 0.491229595527877 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle