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View Structure Prediction Details

Protein: CE39270
Organism: Caenorhabditis elegans
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39270.

Description E-value Query
Range
Subject
Range
gi|110592880, gi... - gi|110592880|ref|ZP_01381235.1| cyclase/dehydrase [Acidovorax sp. JS42], gi|110337825|gb|EAT57536.1|...
171.0 [0..3] [147..39]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYSEKRLIG FSRDEMFKVV SDVSDYHNFV PWCRSSTVTH EHESSQIATL EIGFPPLSEK  60
   61 YSSRVIHIKP SVVHSVVIEN DNLFRTLDTT FRFGKGKPSV ERSCTLHYDL VFEFESAFHS 120
  121 RIAHLFFDKV VKTMVSAFLH RAEKLYGPPE FPHSPPQVLQ YKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.0
Match: 1t17A
Description: Solution Structure of the 18 kDa Protein CC1736 from Caulobacter crescentus: The Northeast Structural Genomics Consortium Target CcR19
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle