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View Structure Prediction Details

Protein: gi|76802633, gi|...
Organism: Natronomonas pharaonis DSM 2160
Length: 759 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|76802633, gi|....

Predicted Domain #1
Region A:
Residues: [1-759]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTVKPLKQ KDAGRGLAAI DRAAMDELDV ENGDYVVLDS GDSRAVARVW PGYPEDEGNG  60
   61 VVRVDGRLRQ EADVGIDDNV HIEPADVNPA KEVTVALPQN LRIRGNIGPH IRDKLSGQAV 120
  121 TEGQNVPFSL GLGPLSSKSG QRIPLKIAGT EPSGTVVVTD STEIQVSEKP AEQIAGPSDG 180
  181 SGAAPGEGGT PSVTYEDIGG LDSELEQVRE MIELPMRHPE LFQQLGIEPP KGVLLHGPPG 240
  241 TGKTLMAKAV ANEIDAHFTD ISGPEIMSKY YGESEEQLRE VFDEASENAP AIVFIDEIDS 300
  301 IAPKRGETSG DVERRVVAQL LSLMDGLEER GDVIVIGATN RVDAIDPALR RGGRFDREIE 360
  361 IGVPDKEGRK EILQVHTRGM PLADGIDLEQ YAENTHGFVG ADLESLTKEA AMNSLRRIRP 420
  421 ELDLEQDEIE AEVLESMTVT ESDFKDALKG VTPSAMREVF VEVPDTTWDA VGGLDDTKSR 480
  481 LRETIQWPLE YPEVFKQMDM QAAKGVLLYG PPGTGKTLMA KAIANEAQSN FISIKGPELL 540
  541 NKYVGESEKG VREVFEKARS NAPTVVFFDE IDSIAGERGE RMGDSGVGER VVSQLLTELD 600
  601 GLEELEDVVV IATTNRPDLI DSALLRPGRL DRHIHVPVPD EEAREAIFAV HTRNKPLADD 660
  661 VDISELAGRT DGYVGADIEA VCREASMAAT REFIESVSPE EAAQSVGNVR ITAEHFEEAL 720
  721 DEVGPSVSED TRERYEEVEE EFTPGEEPSG KSDVGRTFH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 175.0
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle