YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|76802176, gi|...
Organism: Natronomonas pharaonis DSM 2160
Length: 740 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|76802176, gi|....

Predicted Domain #1
Region A:
Residues: [1-740]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEVQLEVAK AYPNDSGRGI ARLDPDTLLH LKLSPGDIIE IEGAETTAAK VWRADRQDWN  60
   61 TDTVRIDGFT RQNADVGIGE RVTIRKADAT KADKLVLAPP EDASVQFGSD AAGMVKRQIL 120
  121 KRPVVERDIV PVMSSTNHPF MRSPGQAIPL IAVETDPDGV CLITEDTEVE LREEPISGFE 180
  181 KTGGGITYED IGGLQNEIQR VREMVELPMK HPQIFKKLGI EPPQGVLLHG PPGTGKTLLA 240
  241 KAVANETSAS FFSIAGPEII SKYYGESEQQ LREIFEDATE ESPSIIFIDE LDSIAPKRED 300
  301 VTGEVERRVV AQLLTMMDGL ESRGQVIVIA ATNRVDSVDP ALRRPGRFDR EIEIGVPDET 360
  361 GRKEILQIHT RGMPLADDVD LDKMADETHG FVGADIESLT KEAAMKALRR YLPEIDLDEE 420
  421 DIPPSLIDRM IIKRQDFRGA LNEVDPSAMR EVLVELPKVS WDDVGGLTEA KEQVQESVEW 480
  481 PMNAGEKFSR MGIEPPSGVL LYGPPGTGKT LMAKAVANET NANFISVRGP QLLSKWVGES 540
  541 EKAIRQTFRK ARQVSPTIIF FDELDSLAPG RGGEVGSNVS ERVVNQLLTE LDGLEEMDDV 600
  601 MVIGATNRPD MIDPALIRSG RFDRLVMVGE PDLDGREKIL RIHTGDTPLA PDVSLRELAE 660
  661 MTDGYVGSDL ESITREAAIE ALREDDDAEA VEMRHFREAV ESVRPTITDD IRNYYEQIEE 720
  721 EFRGGTPDGR RQSGGRIGFQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 174.0
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle